Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq6 132 5e-26
seq17 123 3e-23
>seq6
Length=1708680
Score = 132 bits (146), Expect = 5e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
|| ||| || | || || | ||| | ||| || ||||| |||||||| || ||||||||
Sbjct 770946 CTGTCCGCCACGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGGATATTGTAGTC 771005
Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602
|| ||| || ||| ||||||||||| || || || || | ||||||||||||||
Sbjct 771006 CGAAAGAGTGCGACCGTCCTCGAGCTGTTTACCCGCGAAGATAAGGCGCTGCTGATCGGG 771065
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| ||||| || || |||||||| || || || ||| | ||||| ||||| ||
Sbjct 771066 AGGGATGCCCTCCTTATCTTGAATCTTGCTCTTTACGTTGTCGATGGTGTCAGACGACTC 771125
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || || || ||||| || || || ||||| || |||||
Sbjct 771126 AACCTCTAGAGTGATTGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 771176
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || | ||| || || |||||||| ||||||||||||||
Sbjct 771178 CCACCACGGAGACGAAGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAG 771237
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || ||| |||||||| || ||||| || ||||| ||||||||||| || ||
Sbjct 771238 AGAGTGCGACCGTCCTCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGA 771297
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || ||||| ||||| || || || | || || |||||||| ||
Sbjct 771298 ATACCCTCCTTGTCTTGGATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACC 771357
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || || || | ||| || ||||| ||||||||
Sbjct 771358 TCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || || || ||||||||||||||||| |||
Sbjct 771634 CCACCACGGAGGCGGAGGACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAG 771693
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| ||||| || || ||||| |||||||| || || ||
Sbjct 771694 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 771753
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | ||||| || || || ||
Sbjct 771754 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAACC 771813
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| || ||||| || || ||
Sbjct 771814 TCGAGCGTGATGGTCTTGCCCGT 771836
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || || |||||||| || |||||||||||
Sbjct 771406 CCACCACGGAGGCGGAGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGAC 771465
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| || || ||||| |||||||| || || ||
Sbjct 771466 AGGGTGCGCCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 771525
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | || || || || || ||
Sbjct 771526 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATAGTATCCGAAGACTCGACC 771585
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||| ||||| || | ||||| ||||| || |||||
Sbjct 771586 TCCAAGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 771632
>seq17
Length=926260
Score = 123 bits (136), Expect = 3e-23
Identities = 545/852 (64%), Gaps = 23/852 (3%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
|||||||||||| |||| || || || |||||||||||| | ||||| || ||| |
Sbjct 107384 CAACACATGCTGATGCGTGTCGCTGTCGGCATTCACGGCAATGACATCGAGAAGGCCATT 107325
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| |||||| | ||||| ||| | ||||| ||||| ||||| || | || |
Sbjct 107324 GAGACGTACGACTACATGTCACAGAAGTACTTTACACACGCCTCGCCGACGCTCTTCAAC 107265
Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743
|| ||||| | ||||| ||||||| || || | | |||| || ||||||
Sbjct 107264 GCAGGCACTCCATCCCCTCAGATGTCCTCCTGCTTCCTCATTGACATGAAAGAGGACAGC 107205
Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCGG 7802
|| ||||| || ||| |||| ||| || ||| || ||| || || || |||||
Sbjct 107204 ATTGACGGTATCTACGACACACTGAAGACCTGTGCCTTGATCTCC-AAGACTGCTGGCGG 107146
Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862
|| || || ||||| | | || |||| || | ||||| |||||||||
Sbjct 107145 TATTGGCCTCAACGTGCATCGTATCCGTGCCACAGGCTCCTACATCGGTGGCACCAACGG 107086
Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922
|| | | ||| | || ||| | || || | ||| ||| | | || | || ||
Sbjct 107085 AACTTCGAATGGTCTCATTCCTATGCTCCGTGTCTACAACAACACAGCACGTTACGTTGA 107026
Query 7923 CCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979
|||||| || ||||| || ||| |||||||||| | ||||| |||||||| ||
Sbjct 107025 CCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTATCTTGAGCCATGGCACGCCGA 106966
Query 7980 CATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGA 8039
| | || | || | |||| ||| || ||||| | || || ||
Sbjct 106965 TGTCTTCGGCTTCCTTGACTTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCTCGTGA 106906
Query 8040 TCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACA 8099
||| |||| || |||||| | |||||||| || |||| |||||| || | | |
Sbjct 106905 TCTCTTCTACGCTTTGTGGATCCCCGATCTCTTCATGAAGCGCGTCCAAGAGAATGGTGA 106846
Query 8100 ATGGTCGCTCATGTGCCCCGATCGTTGC-CCTTTATTAAAAAACGTTTACGGTTCAAAAT 8158
|||| |||| | || ||| || | || ||| | | ||||||||| | |
Sbjct 106845 ATGGACGCTGTTCTGTCCCAAT-GAGGCTCCTGGTCTTGCCGATGTTTACGGTGATGAGT 106787
Query 8159 TTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG- 8217
| || | | ||| | | ||||| || || | | |||| | | |||||| ||
Sbjct 106786 TCGAGGAGCTCTACCACCGCTACGA----GAAGGAGAAT-CGTG-GTC--GTGAAACCGT 106735
Query 8218 -CGCGACCTGCACC------GCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTA 8270
|| | || | | | |||||| |||| || | ||| || |||| || |
Sbjct 106734 CCGTGCCCAGAAGCTTTGGTATGCCATTCTCGAGGCGCAGACCGAGACTGGTAACCCTTT 106675
Query 8271 CATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTG 8330
|||||| ||||| ||||| |||||| || ||||| || | ||| |||| || || |
Sbjct 106674 CATGCTCTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGTACTATCCG 106615
Query 8331 TTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTG 8390
|| ||| || ||| |||| || | |||||| || || ||||| ||||| || ||
Sbjct 106614 AAGCTCCAACCTCTGCACTGAGATCATCGAGTACACTGCTCCTGACGAGGTGGCTGTCTG 106555
Query 8391 CAATCTAGCGTC 8402
|||||| || ||
Sbjct 106554 CAATCTTGCTTC 106543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397964093880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |