Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6 132 5e-26 seq17 123 3e-23 >seq6 Length=1708680 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || ||| || | || || | ||| | ||| || ||||| |||||||| || |||||||| Sbjct 770946 CTGTCCGCCACGCAGACGAAGCACCAAGTGCAGAGTGGACTCCTTTTGGATATTGTAGTC 771005 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || ||| || ||| ||||||||||| || || || || | |||||||||||||| Sbjct 771006 CGAAAGAGTGCGACCGTCCTCGAGCTGTTTACCCGCGAAGATAAGGCGCTGCTGATCGGG 771065 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || ||||| || || |||||||| || || || ||| | ||||| ||||| || Sbjct 771066 AGGGATGCCCTCCTTATCTTGAATCTTGCTCTTTACGTTGTCGATGGTGTCAGACGACTC 771125 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || || ||||| || || || ||||| || ||||| Sbjct 771126 AACCTCTAGAGTGATTGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 771176 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || |||||||| |||||||||||||| Sbjct 771178 CCACCACGGAGACGAAGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAG 771237 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| |||||||| || ||||| || ||||| ||||||||||| || || Sbjct 771238 AGAGTGCGACCGTCCTCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGA 771297 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| ||||| || || || | || || |||||||| || Sbjct 771298 ATACCCTCCTTGTCTTGGATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACC 771357 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | ||| || ||||| |||||||| Sbjct 771358 TCGAGGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || || ||||||||||||||||| ||| Sbjct 771634 CCACCACGGAGGCGGAGGACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAG 771693 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| ||||| || || ||||| |||||||| || || || Sbjct 771694 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 771753 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 771754 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAACC 771813 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || || || Sbjct 771814 TCGAGCGTGATGGTCTTGCCCGT 771836 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || |||||||| || ||||||||||| Sbjct 771406 CCACCACGGAGGCGGAGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGAC 771465 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || ||||| |||||||| || || || Sbjct 771466 AGGGTGCGCCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 771525 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | || || || || || || Sbjct 771526 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATAGTATCCGAAGACTCGACC 771585 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| ||||| || | ||||| ||||| || ||||| Sbjct 771586 TCCAAGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 771632 >seq17 Length=926260 Score = 123 bits (136), Expect = 3e-23 Identities = 545/852 (64%), Gaps = 23/852 (3%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 |||||||||||| |||| || || || |||||||||||| | ||||| || ||| | Sbjct 107384 CAACACATGCTGATGCGTGTCGCTGTCGGCATTCACGGCAATGACATCGAGAAGGCCATT 107325 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | ||||| ||| | ||||| ||||| ||||| || | || | Sbjct 107324 GAGACGTACGACTACATGTCACAGAAGTACTTTACACACGCCTCGCCGACGCTCTTCAAC 107265 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || ||||| | ||||| ||||||| || || | | |||| || |||||| Sbjct 107264 GCAGGCACTCCATCCCCTCAGATGTCCTCCTGCTTCCTCATTGACATGAAAGAGGACAGC 107205 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCGG 7802 || ||||| || ||| |||| ||| || ||| || ||| || || || ||||| Sbjct 107204 ATTGACGGTATCTACGACACACTGAAGACCTGTGCCTTGATCTCC-AAGACTGCTGGCGG 107146 Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862 || || || ||||| | | || |||| || | ||||| ||||||||| Sbjct 107145 TATTGGCCTCAACGTGCATCGTATCCGTGCCACAGGCTCCTACATCGGTGGCACCAACGG 107086 Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922 || | | ||| | || ||| | || || | ||| ||| | | || | || || Sbjct 107085 AACTTCGAATGGTCTCATTCCTATGCTCCGTGTCTACAACAACACAGCACGTTACGTTGA 107026 Query 7923 CCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979 |||||| || ||||| || ||| |||||||||| | ||||| |||||||| || Sbjct 107025 CCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTATCTTGAGCCATGGCACGCCGA 106966 Query 7980 CATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGA 8039 | | || | || | |||| ||| || ||||| | || || || Sbjct 106965 TGTCTTCGGCTTCCTTGACTTGCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCTCGTGA 106906 Query 8040 TCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACA 8099 ||| |||| || |||||| | |||||||| || |||| |||||| || | | | Sbjct 106905 TCTCTTCTACGCTTTGTGGATCCCCGATCTCTTCATGAAGCGCGTCCAAGAGAATGGTGA 106846 Query 8100 ATGGTCGCTCATGTGCCCCGATCGTTGC-CCTTTATTAAAAAACGTTTACGGTTCAAAAT 8158 |||| |||| | || ||| || | || ||| | | ||||||||| | | Sbjct 106845 ATGGACGCTGTTCTGTCCCAAT-GAGGCTCCTGGTCTTGCCGATGTTTACGGTGATGAGT 106787 Query 8159 TTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG- 8217 | || | | ||| | | ||||| || || | | |||| | | |||||| || Sbjct 106786 TCGAGGAGCTCTACCACCGCTACGA----GAAGGAGAAT-CGTG-GTC--GTGAAACCGT 106735 Query 8218 -CGCGACCTGCACC------GCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTA 8270 || | || | | | |||||| |||| || | ||| || |||| || | Sbjct 106734 CCGTGCCCAGAAGCTTTGGTATGCCATTCTCGAGGCGCAGACCGAGACTGGTAACCCTTT 106675 Query 8271 CATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTG 8330 |||||| ||||| ||||| |||||| || ||||| || | ||| |||| || || | Sbjct 106674 CATGCTCTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGTACTATCCG 106615 Query 8331 TTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTG 8390 || ||| || ||| |||| || | |||||| || || ||||| ||||| || || Sbjct 106614 AAGCTCCAACCTCTGCACTGAGATCATCGAGTACACTGCTCCTGACGAGGTGGCTGTCTG 106555 Query 8391 CAATCTAGCGTC 8402 |||||| || || Sbjct 106554 CAATCTTGCTTC 106543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397964093880