Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq17 158 2e-33 seq18 95.1 2e-14 >seq17 Length=926260 Score = 158 bits (174), Expect = 2e-33 Identities = 555/858 (65%), Gaps = 14/858 (2%) Strand=Plus/Plus Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336 || || ||||| || || || ||||| | || | | || | || ||||| || || Sbjct 106543 GAAGCAAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAG 106602 Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396 || || | | |||||| ||||| || | ||| || ||||| |||| ||||||||| Sbjct 106603 AGGTTGGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCC 106662 Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456 ||||| || || || || ||||||| || |||| | |||| ||| | | ||||| Sbjct 106663 TTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGC 106722 Query 69457 ACCCTAGCATTTATTACGGTCTTGTAAC---GCTTCTCTTTTTCATATTGTGTATATAGC 69513 | ||| | |||| | || | ||||| || || || | || ||| Sbjct 106723 TTCTGGGCACGGA---CGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTGGTAGAGC 106779 Query 69514 CGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAAT 69573 ||||| ||||| || ||||||| | | |||||| ||||| ||||| | || Sbjct 106780 TCCTCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGC 106839 Query 69574 GACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA 69633 | ||| || ||| || | || || ||||| || |||||||| ||||| | ||| Sbjct 106840 GTCCATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAG 106899 Query 69634 AAGAGATCTCTGGTTCTATTTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTC 69692 |||||||| | | | ||||| || || || | || ||| || || || | Sbjct 106900 AAGAGATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAG-TCAAGGAAGCC 106958 Query 69693 CATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCC 69752 | | ||| | |||||||| || ||||| || || | | | || || || || || || Sbjct 106959 GAAGACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCC 107018 Query 69753 TCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATT 69812 ||||| || | ||| | || ||||| || ||||| | ||||| ||||| | |||||| Sbjct 107019 ACCCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATT 107078 Query 69813 AGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAG 69872 || | || || || ||| || || ||| | || || ||| | | || Sbjct 107079 CGAAGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAG 107138 Query 69873 ACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACC 69932 || || || || || | || ||||| | ||||| |||| |||||| || ||||| Sbjct 107139 GCCAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACC 107198 Query 69933 CTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGT 69992 || ||||| || ||| |||||| || || || ||| ||||| ||| | | ||| Sbjct 107199 GTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGT 107258 Query 69993 TCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAA-GCAGATTGT 70051 || || || || | || || || ||||| || || | || | || | | || | || Sbjct 107259 GCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAG-TCGT 107317 Query 70052 ATGTTTCAATAGCTGATTCTATATCCCACTGA--TGAATTCCTATCGCGACACGCATCAA 70109 | || ||||| || |||| || || || ||||| || | ||||||||||||| Sbjct 107318 ACGTCTCAATGGCC--TTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAG 107375 Query 70110 CATATGCTGAGGTCGTTC 70127 ||| || || || || || Sbjct 107376 CATGTGTTGTGGACGCTC 107393 >seq18 Length=888533 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| ||||| ||| ||| | ||||| || | || | ||||| || ||||| || Sbjct 234627 GCATGCGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAG 234686 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||||||||| ||||||||||| |||| ||||| || || ||||| Sbjct 234687 ACCTGGCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAA 234746 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765 |||||| || || || |||||||| || || Sbjct 234747 GATGCCCTCCACGGCAGCAAATGCGACGAG 234776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908207541160