Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq17 158 2e-33
seq18 95.1 2e-14
>seq17
Length=926260
Score = 158 bits (174), Expect = 2e-33
Identities = 555/858 (65%), Gaps = 14/858 (2%)
Strand=Plus/Plus
Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336
|| || ||||| || || || ||||| | || | | || | || ||||| || ||
Sbjct 106543 GAAGCAAGATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAG 106602
Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396
|| || | | |||||| ||||| || | ||| || ||||| |||| |||||||||
Sbjct 106603 AGGTTGGAGCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCC 106662
Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456
||||| || || || || ||||||| || |||| | |||| ||| | | |||||
Sbjct 106663 TTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGC 106722
Query 69457 ACCCTAGCATTTATTACGGTCTTGTAAC---GCTTCTCTTTTTCATATTGTGTATATAGC 69513
| ||| | |||| | || | ||||| || || || | || |||
Sbjct 106723 TTCTGGGCACGGA---CGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTGGTAGAGC 106779
Query 69514 CGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAAT 69573
||||| ||||| || ||||||| | | |||||| ||||| ||||| | ||
Sbjct 106780 TCCTCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGC 106839
Query 69574 GACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA 69633
| ||| || ||| || | || || ||||| || |||||||| ||||| | |||
Sbjct 106840 GTCCATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAG 106899
Query 69634 AAGAGATCTCTGGTTCTATTTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTC 69692
|||||||| | | | ||||| || || || | || ||| || || || |
Sbjct 106900 AAGAGATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAG-TCAAGGAAGCC 106958
Query 69693 CATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCC 69752
| | ||| | |||||||| || ||||| || || | | | || || || || || ||
Sbjct 106959 GAAGACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCC 107018
Query 69753 TCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATT 69812
||||| || | ||| | || ||||| || ||||| | ||||| ||||| | ||||||
Sbjct 107019 ACCCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATT 107078
Query 69813 AGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAG 69872
|| | || || || ||| || || ||| | || || ||| | | ||
Sbjct 107079 CGAAGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAG 107138
Query 69873 ACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACC 69932
|| || || || || | || ||||| | ||||| |||| |||||| || |||||
Sbjct 107139 GCCAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACC 107198
Query 69933 CTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGT 69992
|| ||||| || ||| |||||| || || || ||| ||||| ||| | | |||
Sbjct 107199 GTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGT 107258
Query 69993 TCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAA-GCAGATTGT 70051
|| || || || | || || || ||||| || || | || | || | | || | ||
Sbjct 107259 GCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAG-TCGT 107317
Query 70052 ATGTTTCAATAGCTGATTCTATATCCCACTGA--TGAATTCCTATCGCGACACGCATCAA 70109
| || ||||| || |||| || || || ||||| || | |||||||||||||
Sbjct 107318 ACGTCTCAATGGCC--TTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAG 107375
Query 70110 CATATGCTGAGGTCGTTC 70127
||| || || || || ||
Sbjct 107376 CATGTGTTGTGGACGCTC 107393
>seq18
Length=888533
Score = 95.1 bits (104), Expect = 2e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||| ||||| ||| ||| | ||||| || | || | ||||| || ||||| ||
Sbjct 234627 GCATGCGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAG 234686
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| ||||||||||| ||||||||||| |||| ||||| || || |||||
Sbjct 234687 ACCTGGCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAA 234746
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765
|||||| || || || |||||||| || ||
Sbjct 234747 GATGCCCTCCACGGCAGCAAATGCGACGAG 234776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908207541160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |