Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq17 327 1e-84 seq18 109 7e-19 >seq17 Length=926260 Score = 327 bits (362), Expect = 1e-84 Identities = 1137/1748 (65%), Gaps = 51/1748 (3%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 ||||| |||||||| || |||||||| || | ||||| | | ||||| || | | Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482 | |||| ||| || || | |||| || ||| | | ||| || || |||||| Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783 Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAACTGTG 110539 || || | || ||||| | |||| | ||| || | ||||||||||| || Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGA--TGGTTCG-CTGAGAGATTTCCCAAACAGTC 105840 Query 110540 CGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTC--TGGATGGAACCCCCCG 110597 || ||| ||||| | || || || || | || || || | |||||||| || || Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGT-TGGGA-ATGCGTTGGATGGAGCCACCTT 105898 Query 110598 CCTTCACCATGA---GATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCAT 110654 | | || |||| ||| |||||| | || ||||| ||||| || | || || | Sbjct 105899 C-TGCA--ATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCT 105955 Query 110655 TGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGT 110714 | | || |||||| | |||||||| ||||| | | |||||||| Sbjct 105956 TAAGCAGCCATGGGTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGT 106015 Query 110715 TTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTG 110774 | | ||||||||| |||||||| || || || || | ||| || | ||| || || |||| Sbjct 106016 TCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTG 106075 Query 110775 GCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAA 110834 |||| ||||| ||||||||| ||| |||| ||| | || || ||||| || Sbjct 106076 GCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGG 106135 Query 110835 CATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCC 110892 ||||||| | | | || | || |||| |||| ||||||| ||||||| | || Sbjct 106136 AGGCCCAGTCCCACAGATCAG-TAGGAGTCACATTCC-ACATGTCGTACTGAAGAATACC 106193 Query 110893 TTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACA 110952 || ||| | || |||||||| |||| | || | || | | | || | ||||| Sbjct 106194 CTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACA 106253 Query 110953 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 111012 | |||| ||||| || |||||||| ||||| | || | || |||||| Sbjct 106254 AGATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGC 106313 Query 111013 TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACAC 111071 || || || || | |||| || | | || |||| || |||||||| |||| Sbjct 106314 CTCTGGCGACTCGAAGGGCAAGCG-CAGAGCCAGGAAAGCATCAGCAAGACCTTGGACAC 106372 Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 111131 ||| |||||||| ||||| || | || || || ||| || || || | Sbjct 106373 CCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGT 106432 Query 111132 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 111191 | || |||| ||| | ||| || |||| || |||| || ||||| |||| Sbjct 106433 TGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTT 106492 Query 111192 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251 | || || || | || | || ||| | ||| || || | || || | || Sbjct 106493 GGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAAGCAAGAT 106552 Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311 |||| |||||| ||| || | | |||||||| | || || || || | |||||| | Sbjct 106553 TGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGC 106612 Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCA 111371 | || || |||| ||||| ||||| |||||| ||||||| || ||||||||||||| Sbjct 106613 TTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCA 106672 Query 111372 TGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTG 111431 || | || | || ||||| ||||| | | |||||| || | ||||| || ||| Sbjct 106673 TGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAA-----GCTTCTG 106727 Query 111432 GTACAATGGCGTTGGCCCGTCC------CTCCGCCTCGTA-CTTTGTGTAGAGGGCTTCA 111484 | || | || | | || || |||| |||||| | || |||||| | || Sbjct 106728 GG-CACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG-GTAGAGCTCCTCG 106785 Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCAT 111544 ||||| ||||| | |||| ||||| || |||| | |||||||| || | |||| Sbjct 106786 AACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCAT 106845 Query 111545 TGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 111604 | |||| || | || ||||||||||| || || || ||||||| | | |||||| Sbjct 106846 TCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGA 106905 Query 111605 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 111664 || | | || ||||||| | || ||||| || || |||||||| | | || | Sbjct 106906 TCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGACA 106965 Query 111665 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCT 111718 || |||||||||||||||||||||| || | | || ||||| ||| | Sbjct 106966 TCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACC---GGGACGCTTGTTGCCACCC 107022 Query 111719 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 111778 || | || || || |||||| ||| | || || ||||| ||||| | ||||| || Sbjct 107023 TGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAA 107082 Query 111779 TGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 111836 || || || || |||| || ||| | |||| | | | ||| | || | | Sbjct 107083 GTTCCGTTGGTGCCACCGATGTAGGAGCCT--GTGGCACGGATACGATGCACGTTGAGGC 107140 Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896 ||||||| ||||| ||| ||||| ||||| | | || || | |||||||||| Sbjct 107141 CAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGT 107200 Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956 || |||||| || || | || |||||||| ||||||||| || ||| || | Sbjct 107201 CAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGC 107260 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 112015 | || |||||||| || || | ||||| | || ||| | || ||||| | |||||| Sbjct 107261 CTGCGTTGAAGAGCGTCGGCGAGGCGTGTGT-AAAGTACTTCTGTGACATGTAGTCGTAC 107319 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 ||||| | | | || ||||| | ||||| ||||||| ||||| ||||| | |||| Sbjct 107320 GTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCATG 107379 Query 112076 TACTGTGG 112083 | ||||| Sbjct 107380 TGTTGTGG 107387 >seq18 Length=888533 Score = 109 bits (120), Expect = 7e-19 Identities = 301/457 (66%), Gaps = 22/457 (5%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || || || |||||||| |||||||||||||| ||| | || ||||| ||||| Sbjct 234343 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTCCATG 234402 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACC-----CCAACTTGTTTGAG 122483 ||||| || || || | || || | | | |||| || ||||| || Sbjct 234403 AAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGAGAGCCAAC-------AG 234455 Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543 || ||||| | || |||||||||||| | |||| | ||||||||| | || Sbjct 234456 CAGGCGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTGGCGTTCATACCAAGAAG 234515 Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603 || ||||| || || | |||| ||| |||||| || ||||| | | ||| Sbjct 234516 TGCGCAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCTCAGTGATGAT 234575 Query 122604 GGCGTGGATAGTTTCGGTAGTGGGTC---TATTACGCAAAGTCTTGAAGAGCTCCACGGC 122660 ||| |||| || || | |||| | | || | | || ||||||| || Sbjct 234576 GGCCTGGACAGACTCCTTGCTGGGGCGGTTGTTGAGAAGAGA---GAAGAGCAGGCATGC 234632 Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720 || || || | |||||| || ||||| || || || || ||||| |||||||| Sbjct 234633 GAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGG 234692 Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 122779 ||| ||||| |||||||| | |||| | || | |||| || || ||| ||||||||| | Sbjct 234693 CATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCA-AAGGAGCCGCTGAAGAAGATGC 234751 Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 ||||||| ||||| || | || || | |||||| Sbjct 234752 CCTCCACGGCAGCAAATGCGACGAGACGGTTGGCGAA 234788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031458322400