Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq17 327 1e-84
seq18 109 7e-19
>seq17
Length=926260
Score = 327 bits (362), Expect = 1e-84
Identities = 1137/1748 (65%), Gaps = 51/1748 (3%)
Strand=Plus/Plus
Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422
||||| |||||||| || |||||||| || | ||||| | | ||||| || | |
Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723
Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482
| |||| ||| || || | |||| || ||| | | ||| || || ||||||
Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783
Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAACTGTG 110539
|| || | || ||||| | |||| | ||| || | ||||||||||| ||
Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGA--TGGTTCG-CTGAGAGATTTCCCAAACAGTC 105840
Query 110540 CGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTC--TGGATGGAACCCCCCG 110597
|| ||| ||||| | || || || || | || || || | |||||||| || ||
Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGT-TGGGA-ATGCGTTGGATGGAGCCACCTT 105898
Query 110598 CCTTCACCATGA---GATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCAT 110654
| | || |||| ||| |||||| | || ||||| ||||| || | || || |
Sbjct 105899 C-TGCA--ATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCT 105955
Query 110655 TGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGT 110714
| | || |||||| | |||||||| ||||| | | ||||||||
Sbjct 105956 TAAGCAGCCATGGGTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGT 106015
Query 110715 TTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTG 110774
| | ||||||||| |||||||| || || || || | ||| || | ||| || || ||||
Sbjct 106016 TCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTG 106075
Query 110775 GCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAA 110834
|||| ||||| ||||||||| ||| |||| ||| | || || ||||| ||
Sbjct 106076 GCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGG 106135
Query 110835 CATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCC 110892
||||||| | | | || | || |||| |||| ||||||| ||||||| | ||
Sbjct 106136 AGGCCCAGTCCCACAGATCAG-TAGGAGTCACATTCC-ACATGTCGTACTGAAGAATACC 106193
Query 110893 TTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACA 110952
|| ||| | || |||||||| |||| | || | || | | | || | |||||
Sbjct 106194 CTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACA 106253
Query 110953 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 111012
| |||| ||||| || |||||||| ||||| | || | || ||||||
Sbjct 106254 AGATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGC 106313
Query 111013 TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACAC 111071
|| || || || | |||| || | | || |||| || |||||||| ||||
Sbjct 106314 CTCTGGCGACTCGAAGGGCAAGCG-CAGAGCCAGGAAAGCATCAGCAAGACCTTGGACAC 106372
Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 111131
||| |||||||| ||||| || | || || || ||| || || || |
Sbjct 106373 CCATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGT 106432
Query 111132 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 111191
| || |||| ||| | ||| || |||| || |||| || ||||| ||||
Sbjct 106433 TGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTT 106492
Query 111192 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251
| || || || | || | || ||| | ||| || || | || || | ||
Sbjct 106493 GGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAAGCAAGAT 106552
Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311
|||| |||||| ||| || | | |||||||| | || || || || | |||||| |
Sbjct 106553 TGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGC 106612
Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCA 111371
| || || |||| ||||| ||||| |||||| ||||||| || |||||||||||||
Sbjct 106613 TTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCA 106672
Query 111372 TGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTG 111431
|| | || | || ||||| ||||| | | |||||| || | ||||| || |||
Sbjct 106673 TGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAA-----GCTTCTG 106727
Query 111432 GTACAATGGCGTTGGCCCGTCC------CTCCGCCTCGTA-CTTTGTGTAGAGGGCTTCA 111484
| || | || | | || || |||| |||||| | || |||||| | ||
Sbjct 106728 GG-CACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG-GTAGAGCTCCTCG 106785
Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCAT 111544
||||| ||||| | |||| ||||| || |||| | |||||||| || | ||||
Sbjct 106786 AACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCAT 106845
Query 111545 TGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 111604
| |||| || | || ||||||||||| || || || ||||||| | | ||||||
Sbjct 106846 TCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGA 106905
Query 111605 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 111664
|| | | || ||||||| | || ||||| || || |||||||| | | || |
Sbjct 106906 TCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGACA 106965
Query 111665 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCT 111718
|| |||||||||||||||||||||| || | | || ||||| ||| |
Sbjct 106966 TCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACC---GGGACGCTTGTTGCCACCC 107022
Query 111719 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 111778
|| | || || || |||||| ||| | || || ||||| ||||| | ||||| ||
Sbjct 107023 TGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAA 107082
Query 111779 TGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 111836
|| || || || |||| || ||| | |||| | | | ||| | || | |
Sbjct 107083 GTTCCGTTGGTGCCACCGATGTAGGAGCCT--GTGGCACGGATACGATGCACGTTGAGGC 107140
Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896
||||||| ||||| ||| ||||| ||||| | | || || | ||||||||||
Sbjct 107141 CAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGT 107200
Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956
|| |||||| || || | || |||||||| ||||||||| || ||| || |
Sbjct 107201 CAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGC 107260
Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 112015
| || |||||||| || || | ||||| | || ||| | || ||||| | ||||||
Sbjct 107261 CTGCGTTGAAGAGCGTCGGCGAGGCGTGTGT-AAAGTACTTCTGTGACATGTAGTCGTAC 107319
Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075
||||| | | | || ||||| | ||||| ||||||| ||||| ||||| | ||||
Sbjct 107320 GTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCATG 107379
Query 112076 TACTGTGG 112083
| |||||
Sbjct 107380 TGTTGTGG 107387
>seq18
Length=888533
Score = 109 bits (120), Expect = 7e-19
Identities = 301/457 (66%), Gaps = 22/457 (5%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| || || || |||||||| |||||||||||||| ||| | || ||||| |||||
Sbjct 234343 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTCCATG 234402
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACC-----CCAACTTGTTTGAG 122483
||||| || || || | || || | | | |||| || ||||| ||
Sbjct 234403 AAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGAGAGCCAAC-------AG 234455
Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543
|| ||||| | || |||||||||||| | |||| | ||||||||| | ||
Sbjct 234456 CAGGCGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTGGCGTTCATACCAAGAAG 234515
Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603
|| ||||| || || | |||| ||| |||||| || ||||| | | |||
Sbjct 234516 TGCGCAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCTCAGTGATGAT 234575
Query 122604 GGCGTGGATAGTTTCGGTAGTGGGTC---TATTACGCAAAGTCTTGAAGAGCTCCACGGC 122660
||| |||| || || | |||| | | || | | || ||||||| ||
Sbjct 234576 GGCCTGGACAGACTCCTTGCTGGGGCGGTTGTTGAGAAGAGA---GAAGAGCAGGCATGC 234632
Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720
|| || || | |||||| || ||||| || || || || ||||| ||||||||
Sbjct 234633 GAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCTGG 234692
Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 122779
||| ||||| |||||||| | |||| | || | |||| || || ||| ||||||||| |
Sbjct 234693 CATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCA-AAGGAGCCGCTGAAGAAGATGC 234751
Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816
||||||| ||||| || | || || | ||||||
Sbjct 234752 CCTCCACGGCAGCAAATGCGACGAGACGGTTGGCGAA 234788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031458322400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |