Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq17 279 6e-70 seq18 105 8e-18 >seq17 Length=926260 Score = 279 bits (308), Expect = 6e-70 Identities = 1123/1742 (64%), Gaps = 39/1742 (2%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| ||||||||||| || ||||||| || | ||||| || | Sbjct 105664 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTG 105723 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | || || | |||| || ||| | | || || |||||||||||| Sbjct 105724 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAG 105783 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTC 118013 || || || || ||||| | || | | ||| || ||||||||| |||||| Sbjct 105784 GCACCACGGTCAGCAGCCATCTGGATGA--TGGTTCG-CTGAGAGATTTCCCAAACAGTC 105840 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 |||| || |||| | || || || || | || ||||||||| ||||| | Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTC- 105899 Query 118074 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130 || | |||| ||| |||||| | || ||||| ||||| || | ||||||| Sbjct 105900 -TG-CAATGATACGATTCTTCATGTTCTCAGACCACAGACCCATATCGACCAGATCCTTA 105957 Query 118131 ACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATAT 118188 | || ||| | |||| || |||||||| ||||| || | ||||| | Sbjct 105958 AGCAGCCATGGGT--TGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGT 106015 Query 118189 TGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGG 118248 | | |||||||||||||||||||| ||||| || | ||| || | || || || || | Sbjct 106016 TCGATGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTG 106075 Query 118249 GCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAG 118308 |||||||||| || | ||| ||| || | ||| | | ||| ||||| || | Sbjct 106076 GCATGGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGG 106135 Query 118309 CGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 118366 | |||||| | || | || | | | | | |||||| || |||| || ||||| Sbjct 106136 AGGCCCAGTCCCACAGATCAG--TAGGAGTCACATTCCACATGTCGTACTGAAGAATACC 106193 Query 118367 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA 118426 || ||| ||||||| ||||| | |||| |||||||| ||| || | || | Sbjct 106194 CTGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACA 106253 Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486 | |||||| ||||| || || ||||| || || | || | |||||| Sbjct 106254 AGATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGC 106313 Query 118487 CTCGTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACAC 118545 ||| || || || | | | ||| | | || |||| || ||||||||||||| Sbjct 106314 CTCTGGCGACTCGAAGGGCAAGC-GCAGAGCCAGGAAAGCATCAGCAAGACCTTGGACAC 106372 Query 118546 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTC--CGAGCGGTCTCCACGGGATAAAA 118603 | | |||||| || | || | | || || | || || ||| || || || Sbjct 106373 CCATGCCAATAGGCCTGTGGCGGAAGTT--GCTGCGACGTGCCTCCTCGACTGGGTAGTG 106430 Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663 || ||||| | | | || | ||| |||||||||| |||| || |||||||| Sbjct 106431 GTTGACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTT 106490 Query 118664 TTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 118723 || | | || || || | || | || ||| | || || || | || || || Sbjct 106491 TTGGAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAAGCAAG 106550 Query 118724 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGA 118783 ||| || |||| ||| || | |||||||||| || || || ||||| | ||| || Sbjct 106551 ATTGCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGA 106610 Query 118784 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAG 118843 || || || |||| |||||| || || ||| |||| || || |||||||| || Sbjct 106611 GCTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAG 106670 Query 118844 CATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAG 118902 |||| | || | || ||||| || || | || |||||| || | ||| | | || | | Sbjct 106671 CATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCTTCTG-GG 106729 Query 118903 CTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTA-CTTTGTGTAGAGGGCTTCAAAC 118961 | | || || | | || ||| | |||||| | || |||||| | || ||| Sbjct 106730 CACGGACGGTTTCACGACCACGATTCTCCTTCTCGTAGCGGTG-GTAGAGCTCCTCGAAC 106788 Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGA 119021 || ||||| | || | || || || |||| || || ||||| || | ||||| | Sbjct 106789 TCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCATTCA 106848 Query 119022 CCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCC 119081 ||| ||| | || |||||||||||||| || |||||||| | || |||||||||| Sbjct 106849 CCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGATCA 106908 Query 119082 CGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 119141 ||| ||| | ||||| | || || || ||||| || | ||| | | || ||| Sbjct 106909 CGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGACATCG 106968 Query 119142 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTT 119198 |||||||| || || || || | || | | || ||| ||| |||||| Sbjct 106969 GCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCA 107028 Query 119199 ACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCA 119258 || || | || ||| ||| | ||||| ||||| ||||||| ||||| || || Sbjct 107029 ACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAAGTTCCG 107088 Query 119259 TTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATAC 119316 || || || |||| || ||| || |||| | || | || | || | ||||||| Sbjct 107089 TTGGTGCCACCGATGTAGGAGCCT--GTGGCACGGATACGATGCACGTTGAGGCCAATAC 107146 Query 119317 CCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCG 119376 | || || ||| ||||| || || | | || || ||||||| || || || Sbjct 107147 CGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTCAATGC 107206 Query 119377 AGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGT 119436 ||| | || | | |||||||||||| ||||| ||||| || || || |||| Sbjct 107207 TGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGCCTGCGT 107266 Query 119437 TGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCC 119495 ||||||| || || | ||||| | || ||| | || ||||| | |||||| ||||| Sbjct 107267 TGAAGAGCGTCGGCGAGGCGTGTGT-AAAGTACTTCTGTGACATGTAGTCGTACGTCTCA 107325 Query 119496 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 119555 | | | ||||| | |||||||| |||| | ||| ||||| | ||||| ||| Sbjct 107326 ATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCATGTGTTGT 107385 Query 119556 GG 119557 || Sbjct 107386 GG 107387 >seq18 Length=888533 Score = 105 bits (116), Expect = 8e-18 Identities = 296/449 (66%), Gaps = 24/449 (5%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| || | | ||| |||||||| Sbjct 234343 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGCGAGATGTTCTCCATG 234402 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA--TTGCTG--GC--ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | || | | ||| || || | | | | || Sbjct 234403 AAGTCGAAGGGGTTGGTGGCATTGTAGACCTTGGTGTTGCCGAGAGCCAAC------AGC 234456 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || ||||| | ||| |||||||||||| |||| || ||||||||| | || Sbjct 234457 AGGCGATCGGCAACGAACTCAATGTACTGGCACATAAGGGTGGCGTTCATACCAAGAAGT 234516 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || ||||| || || | |||| | | |||||| ||||| || | |||| Sbjct 234517 GCGCAGGGGAGAGCCTCGCTCAAGAACTCTTGCTCAATTGTGACAGCCTCAGTGATGATG 234576 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACG--- 130015 || || | | |||| ||| || | | ||| | | || |||||| || | Sbjct 234577 GCCTGGACAGACTCCTTGCTGGGGCGGTTGTTGAGAAGAGA---GAAGAG---CAGGCAT 234630 Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 || || || || | ||||||||| ||||||||||| || || ||||| ||||||| Sbjct 234631 GCGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCT 234690 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| ||||| |||||||| | ||| || || | ||| ||||| ||||||||| Sbjct 234691 GGCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAGATG 234750 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACG 130164 |||||||| || || || | |||||| Sbjct 234751 CCCTCCACGGCAGCAAATGCGACGAGACG 234779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434666599640