Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq17 280 2e-70 seq18 116 4e-21 >seq17 Length=926260 Score = 280 bits (310), Expect = 2e-70 Identities = 1129/1749 (65%), Gaps = 53/1749 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| ||||| | ||||| || || |||| ||||| || | ||||| || | | Sbjct 107387 CCACAACACATGCTGATGCGTGTCGCTGTCGGCATTCACGGCAATGACATCGAGAAGGCC 107328 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| |||||| | ||||| || | ||| || | ||||| | || || ||||| Sbjct 107327 ATTGAGACGTACGACTACATGTCACAGAAGTACTTT-ACACACGCCTCGCCGACGCTCTT 107269 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || ||| || || |||||| |||||||| || | || || ||||| Sbjct 107268 CAACGCAGGCACTCCATCCCCTCAGATGTCCTCCTGCTTCCTCATTGACATGAAAGAGGA 107209 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || |||||||||| | || || | | ||||| ||||| ||| ||||| Sbjct 107208 CAGCATTGACGGTATCTACGACACACTGAAGACCTGTGCCTTGATCTCCAAGACTGCTGG 107149 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518 |||||||| | || | ||| | | | |||| | ||| || |||| || || Sbjct 107148 CGGTATTGGCCTCAACGTGCATCGTATCCGTGCCAC--AGGCTCCTACATCGGTGGCACC 107091 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || || ||||| | ||||| ||||| || || | ||| |||||| || || Sbjct 107090 AACGGAACTTCGAATGGTCTCATTCCTATGCTCCGTGTCTACAACAACACAGCACGTTAC 107031 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | || | ||| ||||| || | | || ||||||||||||||||| Sbjct 107030 GTTGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTATCTTGAGCCATGG 106974 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGC 104690 ||||| ||| || | | |||||||| ||||| ||||| || | || |||| ||| Sbjct 106973 CACGCCGATGTCTTCGGCTTCCTTGACTTGCGCAAGAACCACGGCAAGGAAGAGGTCCGC 106914 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | | || |||||||||| |||| | ||||| || ||||||||||||||| | || | | Sbjct 106913 GCT--CGTGATCTCTTCTACGCTTTGTGGATCCCCGATCTCTTCATGAAGCGCGTCCAAG 106856 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 ||| ||| | ||| | || || ||||| | |||| |||||||| |||||| | Sbjct 106855 AGAATGGTGAATGGACGCTGTTCTGTCCCAATGAGGCTCCTGGTCTTGCCGATGTTTACG 106796 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAG-TACGAG--GAAGAA----GGTCGGGCGACT 104863 |||| ||||| || | || ||| || | |||||| | |||| ||||| | || Sbjct 106795 GTGATGAGTTCGAGGAGCTCTAC-CACCGCTACGAGAAGGAGAATCGTGGTCGTGAAAC- 106738 Query 104864 GCGACGGTG-CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 104922 || | ||| |||| || | ||| | || |||||| || | || ||||||||||| Sbjct 106737 -CGTCCGTGCCCAGAAGC-----TTTGGTATGCCATTCTCGAGGCGCAGACCGAGACTGG 106684 Query 104923 TACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982 || || | |||||| ||||| |||||||| ||| ||||| || || ||||| |||| Sbjct 106683 TAACCCTTTCATGCTCTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGG 106624 Query 104983 TGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 105042 | ||| || ||||| ||||| || || ||| | || | || | || ||| Sbjct 106623 TACTATCCGAAGCTCCAACCTCTGCACTGAGATCATCGAGTACACTGCTCCTGACGAGGT 106564 Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC 105102 |||||| || || || || || | |||||||| | ||| ||| | | | | Sbjct 106563 GGCTGTCTGCAATCTTGCTTCCCTTGCTCTCCCATCCTTTGTTGAT-TACAAGCGTGGCG 106505 Query 105103 A-TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 | || || | |||| || ||||| || || | |||||| || | |||| Sbjct 106504 AGTTCGACTTCCAAAAGCTTCACGAGGTCACCCAGGTTGTCACTCGCAATTTGAACAAGA 106445 Query 105162 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 | || || || ||||| || ||| || ||| || | | ||| | | Sbjct 106444 TCATCGAGGTCAACCACTACCCAGTCGAGGAGGCACGTCGCAGCAACTTCCGCCACAGGC 106385 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT 105280 | ||||| | ||||| || ||||| || |||| ||| | || || ||| | || Sbjct 106384 CTATTGGCATGGGTGTCCAAGGTCTTGCTGATGCTTTCCTGGCTCTG-CGCTTGCCCTTC 106326 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 || || || || ||| | |||| | || || || ||||| || |||||||| Sbjct 106325 GAGTCGCCAGAGGCCAAGAAGCTCAACATCCAGATCTTCGAAACCATCTACCACGCCGCC 106266 Query 105341 CTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || | || || | || ||| || ||||| | |||| |||||||| Sbjct 106265 CTCACTTCATCTTGTGACATCGCCAAGGAACTCGGCCCATACCAGACCTACGAGGGTTCG 106206 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACT 105458 |||| || || || | ||||| | || |||| |||| |||| || | || || | Sbjct 106205 CCAGTGTCTCAGGGTATTCTTCAGTACGACATGT-GGAATGTGACTCCTA-CTGATCTGT 106148 Query 105459 ACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 ||||||| | || ||||| || || | ||| |||| ||| ||| | | Sbjct 106147 GGGACTGGGCCTCCCTGAAGGAGAAGATTGCTCAGCATGGTGTTCGCAACTCTCTTTTGA 106088 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | || || |||||||| || || ||| | || ||| | || || || || |||||||| | Sbjct 106087 TTGCACCCATGCCAACTGCATCTACCTCTCAGATCCTCGGAAACAACGAGTGCTTTGAGC 106028 Query 105579 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 | ||||| |||||||||| | | ||||| || ||||| | |||||| Sbjct 106027 CATACACATCGAACATCTACTCCCGCCGTGTGCTCGCTGGTGAGTTCCAAGTCGTCAAC- 105969 Query 105639 AGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696 ||| || | | || || || || ||||| ||||| || | |||||| ||| Sbjct 105968 -CCATGGCTGCTTAAGGATCTGGTCGATATGGGTCTGTGGTCTGAGAACATGAAGAATCG 105910 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 || | || ||||| ||||| ||| ||| | ||||| | || | |||| Sbjct 105909 TATCATTGCAGAAGGTGGCTCCATCCAACGCATTCCCAACATTCCTGAAGAGACCAAGAC 105850 Query 105757 GTTGTACCGCACAGTTTGGGAAATC---AAGATGAAGGATGTCATTGACATGGCCGCAGA 105813 | ||| || |||||||||||| || ||| | |||| | ||||| || || Sbjct 105849 TCTTTACAAGACTGTTTGGGAAATCTCTCAG-CGAACCA--TCATCCAGATGGCTGCTGA 105793 Query 105814 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGAT 105873 |||||| |||||| ||||| ||| | | || || |||| | || || || Sbjct 105792 CCGTGGTGCCTTCATCGATCAGTCTCAGTCTCTCAACATCCACATGAAGGAGCCTACTAT 105733 Query 105874 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 105933 | |||| || | || |||||| | |||||||| |||||||| ||||| ||||| Sbjct 105732 GGGCAAGATCACGTCGATGCACTTTGCTGGTTGGAAGCTTGGTCTCAAGACGGGCATGTA 105673 Query 105934 TTACCTCCG 105942 |||||||| Sbjct 105672 CTACCTCCG 105664 >seq18 Length=888533 Score = 116 bits (128), Expect = 4e-21 Identities = 153/208 (74%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 94790 |||||| || |||| ||||| || |||||||| | ||| | ||| | || || Sbjct 234852 AGTTCCCTGCATTCGCAAGAAGGCTGATTGGGCCCTTCGATGGATCTCTGACAAGAACTC 234793 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | || || | || ||| |||||||||| || ||||| ||||||||| || Sbjct 234792 ---TACTTTCGCCAACCGTCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGG 234736 Query 94851 TTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 ||||| |||| | || | ||||||||||||||| ||||| ||||||||||| |||| Sbjct 234735 CTCCTT-TGCGTCCATCTTTTGGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGACATTCT 234677 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||||||||| ||||| || |||||||| Sbjct 234676 CCAACGAGCTCATCTCCCGCGACGAGGG 234649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260296937560