Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq17 246 3e-60
seq6 163 3e-35
seq29 102 9e-17
seq16 100 3e-16
seq18 84.2 2e-11
>seq17
Length=926260
Score = 246 bits (272), Expect = 3e-60
Identities = 1114/1748 (64%), Gaps = 71/1748 (4%)
Strand=Plus/Plus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| || || |||||||||||||||||||| || |||||| || | |||||| ||
Sbjct 105661 GTACGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGAC 105720
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||| ||| | | || || | || |||| |||||| ||||||||||||||| ||||
Sbjct 105721 GTGATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTGAGAGACTGAGACTGATCGATG 105780
Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217
|| || ||||| || || ||||| | || || | || | |||||||| || ||
Sbjct 105781 AAGGCACCACGGTCAGCAGCCATCTGGATGATGGTTCGCTGAGAGATTTCCCAAACAGTC 105840
Query 80218 CGATACACCTTACGAAGCTCCTCTGGAATGTCCAGATT---TTGCACACTGCCACCGTCC 80274
|| | | ||| || ||||||| || | ||| | |||||| ||
Sbjct 105841 TTGTAAAGAGTCTTGGTCTCTTCAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTCT 105900
Query 80275 TTTACAATTTGATTTTTCAA-TTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCAC 80333
| || |||| |||| ||| | | ||| | ||| | | | |||||| || |
Sbjct 105901 GCAATGATACGATTCTTCATGTTCTCA-GACCACAGACCCATATCGACCAGATCCTTAAG 105959
Query 80334 AAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGT 80393
|| ||| | | ||||| || ||||| || || || | ||| |
Sbjct 105960 CAGCCATGGGTTGACGACTTGGAACTCACCAGCGAGCACACGGCGGGAGTAGATGTTCGA 106019
Query 80394 AGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCAT 80453
||||| |||||||| ||||||||||||||||||||||| || || || |||||
Sbjct 106020 TGTGTATGGCTCAAAGCACTCGTTGTTTCCGAGGATCTGAGAGGTAGATGCAGTTGGCAT 106079
Query 80454 CGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCA---AATC 80510
|| | | ||| || || || || | || |||| || | ||| || | |
Sbjct 106080 GGGTGCAATCAAAAGAGAGTTGCGAACACCATGCTGAGCAATCTTCTCCTTCAGGGAGGC 106139
Query 80511 TGA---CCAAAAATCAACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGCCC 80565
| ||| | |||| | || || ||||||||||| ||| | || |||
Sbjct 106140 CCAGTCCCACAGATCAGTAGGA-----GTCACATTCCACATGTCGTACTGAAGAATACCC 106194
Query 80566 TCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACAC 80625
| ||| | || || ||| || | |||| ||| ||||| |||||| | |||||
Sbjct 106195 TGAGACACTGGCGAACCCTCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACAA 106254
Query 80626 GACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA-CACCGCGCGC 80684
|| | ||||| ||||| || ||| || |||| |||| | | | | ||
Sbjct 106255 GATGAAGTGAGGGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTG-GC 106313
Query 80685 CTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCC 80744
|| ||| ||||| | ||||| || || ||| | ||||| || || || || ||
Sbjct 106314 CTCTGGCGACTCGAAGGGCAAGCGCAGAGCCAGGAAAGCATCAGCAAGACCTTGGACACC 106373
Query 80745 GATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTT 80804
||| | || || | |||||| ||| || |||||| | |||||| |||
Sbjct 106374 CATGCCAATAGGCCTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGTT 106433
Query 80805 ATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTG 80864
||||||| ||||| ||||| || |||||| | || || || ||||| || ||
Sbjct 106434 GACCTCGATGATCTTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGTGAAGCTTTTG 106493
Query 80865 AAAGTCGAATTGGTTCCCCTTC------ACAAATGCCGGAAGGCTCAGGGACGCCAGATT 80918
|||||||| | | | ||| ||||| | || || ||||| || |||||
Sbjct 106494 GAAGTCGAACTCGCCACGCTTGTAATCAACAAAGGATGGGAGAGCAAGGGAAGCAAGATT 106553
Query 80919 GCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGA 80978
||| || |||||||| |||| | | || |||||| ||| || ||||| | || ||
Sbjct 106554 GCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAG-- 106611
Query 80979 CTTA--ATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCAC 81036
||| || ||||||||||| |||||||| ||| |||||| |||||||||||| |
Sbjct 106612 CTTCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGC 106671
Query 81037 ATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCT-------- 81088
||| | ||| |||| |||||| ||| | || ||| ||||| | ||||| ||
Sbjct 106672 ATGAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCTTCTGGGCA 106731
Query 81089 CGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCG 81147
|| || || || ||| | ||| |||| | | || | ||| ||| ||
Sbjct 106732 CGGACGGTTTCACGACCACG----ATTCTCCTT----CTCGTAGCGGTGGTAGAGC-TCC 106782
Query 81148 TCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGC 81207
||||||| |||||| || || | || | || ||| || || || | ||| |
Sbjct 106783 TCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTC 106842
Query 81208 CAGTCGGTGTCGTTCTCT---ACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264
|| || | |||||| || ||||||||| || |||||||| | ||| |
Sbjct 106843 CATTC---ACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAG 106899
Query 81265 AACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGT 81322
|| || || || |||||| |||| || | || ||||| |||||| || || |||
Sbjct 106900 AAGAGATCACG--AGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGC 106957
Query 81323 CCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG----- 81377
| | || || || ||||||||||| ||||| | ||| | | || | ||||
Sbjct 106958 CGAAGACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACC---GGGACGCTTGT 107014
Query 81378 -GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATAC 81436
||||||||||| |||||||| || || ||| | ||||| | |||||| |||| ||
Sbjct 107015 TGCCACCCTGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGAC 107074
Query 81437 CATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTGAT 81494
||| || ||||| || || |||| || || |||| || || ||| |
Sbjct 107075 CATTCGAAGTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGT 107134
Query 81495 TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATA 81554
|| || || || || || | ||| || ||| ||||| |||| || || ||
Sbjct 107135 TG--AGGCCAATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTA 107192
Query 81555 AATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT 81614
|| || || ||||| || | ||||||||||| | ||| ||| ||||||||||||
Sbjct 107193 GATACCGTCAATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGA 107252
Query 81615 TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAG 81674
| | ||| || ||||| || || || | ||||| | || || | ||||||
Sbjct 107253 TGGAGTGCCTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTA 107312
Query 81675 GTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCAT 81734
||| || || || || | || || | |||||||| |||| ||| ||||||||
Sbjct 107313 GTCGTACGTCTCAATGGCCTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCAT 107372
Query 81735 AAACATGT 81742
| |||||
Sbjct 107373 CAGCATGT 107380
>seq6
Length=1708680
Score = 163 bits (180), Expect = 3e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| | ||||||||||| || ||||| ||||||||||| |
Sbjct 771176 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACAATCACTCTAGAGGTTGAGTCGTCT 771117
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| || ||||| || |||||||| || ||||| || |||
Sbjct 771116 GACACCATCGACAACGTAAAGAGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGATCAG 771057
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || ||||| || |||||||| | ||| || || | ||||| |||
Sbjct 771056 CAGCGCCTTATCTTCGCGGGTAAACAGCTCGAGGACGGTCGCACTCTTTCGGACTACAAT 770997
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||||||||| |||||||| || | || | ||||| || || |||||
Sbjct 770996 ATCCAAAAGGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGTGGCGGACA 770947
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| ||||| || || || || ||||| || || | ||||| |||||
Sbjct 771632 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCTTGGAGGTCGAGTCTTCG 771573
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | ||| || || ||||| |||||||| |||||||| ||||||
Sbjct 771572 GATACTATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAG 771513
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || ||||| ||||| || ||||||| || ||||| | ||||| ||
Sbjct 771512 CAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGCACCCTGTCGGACTACAAC 771453
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || || ||||| ||| | || || || |||||
Sbjct 771452 ATCCAGAAGGAATCGACCCTCCATCTCGTCCTCCGCCTCCGTGGTGG 771406
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || || || ||||| || || || ||||| || ||
Sbjct 771404 ATGCAAATCTTCGTCAAGACTCTCACAGGAAAGACCATCACCCTCGAGGTCGAATCGTCA 771345
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| || | ||| ||||| || ||||||||||| ||||| ||||| |||
Sbjct 771344 GATACCATTGATAACGTAAAGAGCAAAATCCAAGACAAGGAGGGTATTCCCCCAGATCAG 771285
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || || || ||||| |||||||| | ||| || || | ||||| ||
Sbjct 771284 CAGCGCTTGATCTTCGCAGGAAAGCAGCTCGAGGACGGTCGCACTCTCTCTGACTACAAC 771225
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| || || || | || | ||||| || |||||
Sbjct 771224 ATTCAGAAGGAATCTACACTCCACTTGGTTCTTCGTCTCCGTGGTGG 771178
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || || ||||||||||| || | || | || | |||
Sbjct 771836 ACGGGCAAGACCATCACGCTCGAGGTTGAGTCCTCGGACACTATCGACAACGTCAAGAGC 771777
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||| |||||||| || ||||| ||||||||||| | || || || || |||
Sbjct 771776 AAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATCTTCGCCGGCAAG 771717
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| ||||| || | || ||||| | || || || | |||||||| || || || ||
Sbjct 771716 CAGCTCGAAGACGGCCGCACCCTCTCCGATTACAACATTCAAAAGGAGTCAACCCTCCAC 771657
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || || |||||
Sbjct 771656 CTCGTCCTCCGCCTCCGTGGTGG 771634
>seq29
Length=430389
Score = 102 bits (112), Expect = 9e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||||||||| || ||||||||||| || || || || || ||||| ||||||
Sbjct 67475 GACAAGGAGGGAATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 67534
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | |||||||| | ||||| || |||| ||||| || || || || | ||| |
Sbjct 67535 GACGGCCGTACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCTC 67594
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 67595 CGCCTCCGTGGTGG 67608
>seq16
Length=934283
Score = 100 bits (110), Expect = 3e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||| | || || ||||| |||||||| ||||| || ||||||||||| || ||
Sbjct 373897 AATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATC 373838
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| |||||||| | || || || | ||||| || |||| |||||
Sbjct 373837 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAG 373778
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || || || | ||| | ||||| || |||||
Sbjct 373777 TCAACGCTCCACTTGGTCCTCCGTCTCCGTGGTGG 373743
>seq18
Length=888533
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 64717 CGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATT 64776
||||||| || ||||| ||||| || || ||||| || || || || ||
Sbjct 234779 CGTCTCGTCGCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGGCTCCTTTGCGTCCATC 234720
Query 64777 TTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCT 64836
|| ||||| || ||||| || ||||||||||||||| | || || |||||||| |||||
Sbjct 234719 TTTTGGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGACATTCTCCAACGAGCTCATCTCC 234660
Query 64837 CGGGACGAGGG 64847
|| ||||||||
Sbjct 234659 CGCGACGAGGG 234649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309908107280
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