Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq6 167 5e-36
seq17 120 7e-22
seq29 102 2e-16
seq16 100 7e-16
>seq6
Length=1708680
Score = 167 bits (184), Expect = 5e-36
Identities = 151/190 (79%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| ||||| ||||| ||||| | ||||| | || |||
Sbjct 771649 AGGACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCT 771708
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| | ||| || ||||||||||| | || ||||| |||
Sbjct 771709 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 771768
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| ||||| ||| ||||||||||| ||||| |||
Sbjct 771769 TGGATCTTGCTCTTGACGTTGTCGATAGTGTCCGAGGACTCAACCTCGAGCGTGATGGTC 771828
Query 211083 TTTCCCGTGA 211092
|| |||||||
Sbjct 771829 TTGCCCGTGA 771838
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| ||||||||||| |||||||| || || |||| ||| || | || ||
Sbjct 770965 AGCACCAAGTGCAGAGTGGACTCCTTTTGGATATTGTAGTCCGAAAGAGTGCGACCGTCC 771024
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || |||||||||||||| || || || ||||| | || ||||| ||
Sbjct 771025 TCGAGCTGTTTACCCGCGAAGATAAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTATCT 771084
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| |||||||||||||| |||||||| |||||||| |||
Sbjct 771085 TGAATCTTGCTCTTTACGTTGTCGATGGTGTCAGACGACTCAACCTCTAGAGTGATTGTC 771144
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 771145 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 771176
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || || || || || || |||||||| || |||| ||||| | |||||
Sbjct 771421 AGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGCCCATCC 771480
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| | ||| || ||||||||||||| || ||||| |||
Sbjct 771481 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 771540
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| || || || || ||||| | ||||| |||
Sbjct 771541 TGGATCTTGCTCTTGACATTGTCGATAGTATCCGAAGACTCGACCTCCAAGGTGATGGTC 771600
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| || || || || | ||||||
Sbjct 771601 TTACCCGTGAGGGTTTTGACGAAGATCTGCAT 771632
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || || || || || ||||| || || | || || | || ||
Sbjct 771193 AGAACCAAGTGGAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGACCGTCC 771252
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| ||||||||||| | ||| || || || || |||| || ||||||||
Sbjct 771253 TCGAGCTGCTTTCCTGCGAAGATCAAGCGCTGCTGATCTGGGGGAATACCCTCCTTGTCT 771312
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || || ||||| || ||||| || || ||| |||||||| ||||| |||
Sbjct 771313 TGGATTTTGCTCTTTACGTTATCAATGGTATCTGACGATTCGACCTCGAGGGTGATGGTC 771372
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||||||||| || || | |||||
Sbjct 771373 TTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 771404
>seq17
Length=926260
Score = 120 bits (132), Expect = 7e-22
Identities = 194/276 (70%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152
|||||| ||||||||||| ||| ||| || ||||| ||||| || | ||
Sbjct 106629 GTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGAAAGGGTTACCAGT 106688
Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212
||| | || ||| |||||||| || |||||||| |||||| ||||| || || | |
Sbjct 106689 CTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCTTCTGGGCACGGACGGT-TTCACGAC 106747
Query 178213 TT---TTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
||| || |||||||| | ||||||||||||||| || || || |||||
Sbjct 106748 CACGATTC--TCCTTCTCGTAGCGGTGGTAGAGCTCCTCGAACTCATCACCGTAAACATC 106805
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| ||||| |||||||||||||| ||||| || |||| | ||| | || | || ||
Sbjct 106806 GGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCATTCACCATTCTCTTGGACGCG 106865
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
||||||||||| || | | |||| | || |||||
Sbjct 106866 CTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAA 106901
>seq29
Length=430389
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || || ||||| || |||||||| || || | ||||| | || ||
Sbjct 67593 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 67534
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| ||||| || |||||||| |||| ||| ||||||||
Sbjct 67533 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTC 67475
>seq16
Length=934283
Score = 100 bits (110), Expect = 7e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || || ||||| || |||||||| || || | || || | || ||
Sbjct 373758 AGGACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 373817
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || ||||| || |||| || ||||| |||
Sbjct 373818 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCC 373877
Query 211023 TGGATCTT 211030
||||||||
Sbjct 373878 TGGATCTT 373885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150975237185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |