Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq17 113 6e-20 seq18 91.5 2e-13 >seq17 Length=926260 Score = 113 bits (124), Expect = 6e-20 Identities = 369/570 (65%), Gaps = 5/570 (1%) Strand=Plus/Plus Query 76776 TCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTT 76835 |||| || || || || |||| ||| |||| | ||||| || |||||||| || || Sbjct 105625 TCCACAGTGAATTGGATAGGAGCAGAGGCGGCCATGGTACGGAGGTAGTACATGCCCGTC 105684 Query 76836 TTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCG 76895 || ||||| || |||| || || ||||| || | ||| | |||| || Sbjct 105685 TTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTGATCTTGCCCATAGTAGGCTCC 105744 Query 76896 GCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATT 76955 || || || || | |||||| ||||||||||| || || | ||||| ||||| Sbjct 105745 TTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATC 105804 Query 76956 TTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCT 77015 | || ||||| |||| |||||||||| ||| ||| ||| ||| | || || Sbjct 105805 TGGATGATGGTTCGCTGAGAGATTTCCCAAACAGTCTTGTAAAGAGTCTTGGTCTCTTCA 105864 Query 77016 GGAAGGTTTGTATT---TTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCA 77072 |||| ||| | | | ||| ||||| ||||| |||| || || |||||| || | Sbjct 105865 GGAATGTTGGGAATGCGTTGGATGGAGCCACCTTCTGCAATGATACGATTCTTCATGTTC 105924 Query 77073 TCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 ||| ||||| | | || | | | |||| || || || || | ||| || Sbjct 105925 TCAGACCACAGACCCATATCGACCAGATCCTTAAGCAGCCATGGGTTGACGACTTGGAAC 105984 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 || |||| | || | || | ||| || || || ||||| || | | || ||| Sbjct 105985 TCACCAGCGAGCACACGGCGGGAGTAGATGTTCGATGTGTATGGCTCAAAGCACTCGTTG 106044 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 ||||| | || |||| ||||| ||||||||||| ||||| | ||| | | || | Sbjct 106045 TTTCCGAGGATCTGAGAGGTAGATGCAGTTGGCATGGGTGCAATCAAAAGAGAGTTGCGA 106104 Query 77253 AGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTAC 77311 | |||||| || | || || || || || | ||| ||||| ||||| | ||| Sbjct 106105 ACACCATGCTGAGC-AATCTTCTCCTTCAGGGAGGCCCAGTCCCACAGATCAGTAGGAGT 106163 Query 77312 AACATCCCAAAGATCGTATTGTAGAATTCC 77341 |||| ||| | ||||| || ||||| || Sbjct 106164 CACATTCCACATGTCGTACTGAAGAATACC 106193 >seq18 Length=888533 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 ||||| |||||| ||| | ||| || || | || | ||||| || ||||| ||| Sbjct 234628 CATGCGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGA 234687 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || ||||| || ||||| || ||||||||||| || | ||| || || || ||||| Sbjct 234688 CCTGGCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAG 234747 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GT 48317 ||||| || ||||| ||||||||| || | | || || | | | |||| Sbjct 234748 ATGCCCTCCACGGCAGCAAATGCGACGAGACGGTTGGCGAAAGTAGAGTTCTTGTCAGAG 234807 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTT 48346 ||||| || | ||||||||||||||||| Sbjct 234808 ATCCATCGAAGGGCCCAATCAGCCTTCTT 234836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668200848160