Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq17 113 6e-20
seq18 91.5 2e-13
>seq17
Length=926260
Score = 113 bits (124), Expect = 6e-20
Identities = 369/570 (65%), Gaps = 5/570 (1%)
Strand=Plus/Plus
Query 76776 TCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTT 76835
|||| || || || || |||| ||| |||| | ||||| || |||||||| || ||
Sbjct 105625 TCCACAGTGAATTGGATAGGAGCAGAGGCGGCCATGGTACGGAGGTAGTACATGCCCGTC 105684
Query 76836 TTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCG 76895
|| ||||| || |||| || || ||||| || | ||| | |||| ||
Sbjct 105685 TTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACGTGATCTTGCCCATAGTAGGCTCC 105744
Query 76896 GCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATT 76955
|| || || || | |||||| ||||||||||| || || | ||||| |||||
Sbjct 105745 TTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATC 105804
Query 76956 TTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCT 77015
| || ||||| |||| |||||||||| ||| ||| ||| ||| | || ||
Sbjct 105805 TGGATGATGGTTCGCTGAGAGATTTCCCAAACAGTCTTGTAAAGAGTCTTGGTCTCTTCA 105864
Query 77016 GGAAGGTTTGTATT---TTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCA 77072
|||| ||| | | | ||| ||||| ||||| |||| || || |||||| || |
Sbjct 105865 GGAATGTTGGGAATGCGTTGGATGGAGCCACCTTCTGCAATGATACGATTCTTCATGTTC 105924
Query 77073 TCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132
||| ||||| | | || | | | |||| || || || || | ||| ||
Sbjct 105925 TCAGACCACAGACCCATATCGACCAGATCCTTAAGCAGCCATGGGTTGACGACTTGGAAC 105984
Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192
|| |||| | || | || | ||| || || || ||||| || | | || |||
Sbjct 105985 TCACCAGCGAGCACACGGCGGGAGTAGATGTTCGATGTGTATGGCTCAAAGCACTCGTTG 106044
Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252
||||| | || |||| ||||| ||||||||||| ||||| | ||| | | || |
Sbjct 106045 TTTCCGAGGATCTGAGAGGTAGATGCAGTTGGCATGGGTGCAATCAAAAGAGAGTTGCGA 106104
Query 77253 AGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTAC 77311
| |||||| || | || || || || || | ||| ||||| ||||| | |||
Sbjct 106105 ACACCATGCTGAGC-AATCTTCTCCTTCAGGGAGGCCCAGTCCCACAGATCAGTAGGAGT 106163
Query 77312 AACATCCCAAAGATCGTATTGTAGAATTCC 77341
|||| ||| | ||||| || ||||| ||
Sbjct 106164 CACATTCCACATGTCGTACTGAAGAATACC 106193
>seq18
Length=888533
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
||||| |||||| ||| | ||| || || | || | ||||| || ||||| |||
Sbjct 234628 CATGCGAAATCAGTATGCATACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAATGTCAGA 234687
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|| ||||| || ||||| || ||||||||||| || | ||| || || || |||||
Sbjct 234688 CCTGGCATCAGACCACGCTTCTTGAGCCAAAAGATGGACGCAAAGGAGCCGCTGAAGAAG 234747
Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GT 48317
||||| || ||||| ||||||||| || | | || || | | | ||||
Sbjct 234748 ATGCCCTCCACGGCAGCAAATGCGACGAGACGGTTGGCGAAAGTAGAGTTCTTGTCAGAG 234807
Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTT 48346
||||| || | |||||||||||||||||
Sbjct 234808 ATCCATCGAAGGGCCCAATCAGCCTTCTT 234836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668200848160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |