Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq17 138 2e-27 >seq17 Length=926260 Score = 138 bits (152), Expect = 2e-27 Identities = 404/616 (66%), Gaps = 10/616 (2%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || ||||| || ||||||| | | ||||||| ||||| ||||| | || | | Sbjct 106783 TCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTC 106842 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||||| || | || || ||||| |||||||| || ||||| | ||| || Sbjct 106843 CATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAG 106902 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| || | | ||||| || || ||||| | || ||||| | | Sbjct 106903 AGATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAG 106962 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | |||||||| || ||||| || || | |||| || || || || || ||| Sbjct 106963 ACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCC 107022 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | || | || ||||| || || || | | ||| ||||| | || || || Sbjct 107023 TGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAA 107082 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 || || || || ||| || || || ||||| ||| | | ||||| Sbjct 107083 GTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAGGCCA 107142 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || ||||| | |||||| |||| |||||| ||||| || || Sbjct 107143 ATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTCA 107202 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG--ATGAACAGTTC 76997 || || || || |||||| || || || ||| ||||| ||| | ||| | || | Sbjct 107203 ATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGA--GTGC 107260 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAA-GTAGATTGTAT 77056 |||| || || | || || || || || || || | || | || | |||| | ||| Sbjct 107261 CTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAG-TCGTAC 107319 Query 77057 GTTTCAATAACTGCTTCTATATCCCATTGA--TGAATTCCTACAGCGACACGCATCAACA 77114 || ||||| | ||||| || ||||| ||||| || |||||||||||||||| || Sbjct 107320 GTCTCAATGGC--CTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCA 107377 Query 77115 TATGCTGAGGTCGTTC 77130 | || || || || || Sbjct 107378 TGTGTTGTGGACGCTC 107393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933785094080