Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq17 138 2e-27
>seq17
Length=926260
Score = 138 bits (152), Expect = 2e-27
Identities = 404/616 (66%), Gaps = 10/616 (2%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|| || ||||| || ||||||| | | ||||||| ||||| ||||| | || | |
Sbjct 106783 TCGAACTCATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTC 106842
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| ||||||| || | || || ||||| |||||||| || ||||| | ||| ||
Sbjct 106843 CATTCACCATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAG 106902
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
||||| || | | ||||| || || ||||| | || ||||| | |
Sbjct 106903 AGATCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAG 106962
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
| ||| | |||||||| || ||||| || || | |||| || || || || || |||
Sbjct 106963 ACATCGGCGTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCC 107022
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | || | || ||||| || || || | | ||| ||||| | || || ||
Sbjct 107023 TGGTCAACGTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAA 107082
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
|| || || || ||| || || || ||||| ||| | | |||||
Sbjct 107083 GTTCCGTTGGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAGGCCA 107142
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || | || ||||| | |||||| |||| |||||| ||||| || ||
Sbjct 107143 ATACCGCCAGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTCA 107202
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG--ATGAACAGTTC 76997
|| || || || |||||| || || || ||| ||||| ||| | ||| | || |
Sbjct 107203 ATGCTGTCCTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGA--GTGC 107260
Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAA-GTAGATTGTAT 77056
|||| || || | || || || || || || || | || | || | |||| | |||
Sbjct 107261 CTGCGTTGAAGAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAG-TCGTAC 107319
Query 77057 GTTTCAATAACTGCTTCTATATCCCATTGA--TGAATTCCTACAGCGACACGCATCAACA 77114
|| ||||| | ||||| || ||||| ||||| || |||||||||||||||| ||
Sbjct 107320 GTCTCAATGGC--CTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACACGCATCAGCA 107377
Query 77115 TATGCTGAGGTCGTTC 77130
| || || || || ||
Sbjct 107378 TGTGTTGTGGACGCTC 107393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933785094080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |