Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq13 113 1e-19
>seq13
Length=704243
Score = 113 bits (124), Expect = 1e-19
Identities = 281/419 (67%), Gaps = 12/419 (3%)
Strand=Plus/Plus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
||||||| |||||| ||| ||| | ||||| |||||| | || |||||| |||
Sbjct 439900 CCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCA 439959
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355
| || |||||||| | || || | | |||| | || | | ||| |||| |
Sbjct 439960 TTTCGCGTGACGAGGGCATGCA-CACCGATTTCGCCTGCCTCCTCTTTTCT---CTCCTG 440015
Query 230356 AACAAGCTACCATTC---GAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAA 230412
|||| | || | ||| ||||| | ||||| || ||||| || || |||
Sbjct 440016 AACACTCGTCCCAGCAAGGAGTCGGTCCAGGCCATCATCACTGAAGCTGTCACAATCGAG 440075
Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTAT 230471
|||| ||| | ||| ||| | || || ||| || | |||||||||||| || ||
Sbjct 440076 CAGGAATTCCTGACTGAGGCTCTGCCTTG-CGCTCTGCTCGGCATGAACGCTACCCTCAT 440134
Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531
| | || ||||| || ||||| |||||||| | | | || || ||| || || ||
Sbjct 440135 GTGCCAATACATTGAGTTCGTTGCCGACCGTCTGCTCTTGGCTCTCGGTAACACCAAGGT 440194
Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591
|||||| | | |||||||| | || |||||| || || | || ||||||||
Sbjct 440195 GTACAATGCCACCAACCCCTTCGACTTCATGGAGAATATCTCCTTGGCTGGCAAGACCAA 440254
Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAGA 230648
||||||||| ||||| || | ||||| |||| | ||||||| ||| ||| ||||||
Sbjct 440255 CTTCTTCGAGAAGCGCGTTGGCGACTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGA 440313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057820557444020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |