Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq13 113 1e-19 >seq13 Length=704243 Score = 113 bits (124), Expect = 1e-19 Identities = 281/419 (67%), Gaps = 12/419 (3%) Strand=Plus/Plus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| |||||| ||| ||| | ||||| |||||| | || |||||| ||| Sbjct 439900 CCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCA 439959 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 | || |||||||| | || || | | |||| | || | | ||| |||| | Sbjct 439960 TTTCGCGTGACGAGGGCATGCA-CACCGATTTCGCCTGCCTCCTCTTTTCT---CTCCTG 440015 Query 230356 AACAAGCTACCATTC---GAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAA 230412 |||| | || | ||| ||||| | ||||| || ||||| || || ||| Sbjct 440016 AACACTCGTCCCAGCAAGGAGTCGGTCCAGGCCATCATCACTGAAGCTGTCACAATCGAG 440075 Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTAT 230471 |||| ||| | ||| ||| | || || ||| || | |||||||||||| || || Sbjct 440076 CAGGAATTCCTGACTGAGGCTCTGCCTTG-CGCTCTGCTCGGCATGAACGCTACCCTCAT 440134 Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531 | | || ||||| || ||||| |||||||| | | | || || ||| || || || Sbjct 440135 GTGCCAATACATTGAGTTCGTTGCCGACCGTCTGCTCTTGGCTCTCGGTAACACCAAGGT 440194 Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591 |||||| | | |||||||| | || |||||| || || | || |||||||| Sbjct 440195 GTACAATGCCACCAACCCCTTCGACTTCATGGAGAATATCTCCTTGGCTGGCAAGACCAA 440254 Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAGA 230648 ||||||||| ||||| || | ||||| |||| | ||||||| ||| ||| |||||| Sbjct 440255 CTTCTTCGAGAAGCGCGTTGGCGACTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGA 440313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057820557444020