Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 7e-11 >seq5 Length=873697 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| |||||||| ||||| |||||||| ||| ||| | | Sbjct 39120 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACCATTACGCTCGAGGTGGAGTCATCG 39061 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| || ||| ||||| || ||| | || |||||| Sbjct 39060 GATACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCAGATCAG 39001 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | || || || || ||||| || | |||||| ||| | | || |||||| Sbjct 39000 CAACGTCTCATTTTCGCTGGCAAGCAGTTAGAAGATGGGCGTACTCTCTCGGACTACAAT 38941 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 |||||||||||||| || || ||| ||||| Sbjct 38940 ATTCAGAAGGAATCCACGCTCCACTTGGTG 38911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428334674032370