Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq38 100 3e-16 >seq38 Length=367138 Score = 100 bits (110), Expect = 3e-16 Identities = 184/267 (69%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 145999 TGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGC 146058 || ||||| |||||||| ||||||| |||| | ||| | || ||||||||| Sbjct 34388 TGATCCACTCCCTGCCCAGTGTAATCTTCCTTGTGCCCTTTGTATTCCGCGCCGAAGTGC 34447 Query 146059 CTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCC 146118 | ||| ||||| ||||| || || || || || || | ||| |||||| || || | Sbjct 34448 CGCCATTGGAATCCGTATACTGGGCCGAGTTCGCCTGCCTCGTAGTGCCCGAGTCCTACG 34507 Query 146119 CGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCG-CGGAGAG 146177 | | | ||| | || || || |||||| ||||||||||||| | ||| || ||||||| Sbjct 34508 CTGTCTAGGTACTCTCGCGAGCCGTTGCCGTCCCAGATCTTTA-TCCCAGCGTCGGAGAG 34566 Query 146178 CTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCA 146237 | | || || || ||| ||||||||| |||| |||| ||| || | | Sbjct 34567 AGACTGGCTGTGTGTTGAGCCCGCGATGAACCATAGCAACTCTCCGATTACGGCTCGTAG 34626 Query 146238 GAAGACCCTCTTGGTGGTCAGCAGGGG 146264 ||| ||||| || || || || ||||| Sbjct 34627 GAATACCCTTTTTGTTGTGAGGAGGGG 34653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074926506160