Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq5 86.0 5e-12
>seq5
Length=873697
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| |||||||| ||||| |||||||| ||| ||| | |
Sbjct 39120 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACCATTACGCTCGAGGTGGAGTCATCG 39061
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| || ||| ||||| || ||| | || ||||||
Sbjct 39060 GATACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCAGATCAG 39001
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
||| | || || || || ||||| || || |||||| ||| | | || ||||||
Sbjct 39000 CAACGTCTCATTTTCGCTGGCAAGCAGTTAGAAGATGGGCGTACTCTCTCGGACTACAAT 38941
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244
||||| |||||||| || || ||| |||||
Sbjct 38940 ATTCAGAAGGAATCCACGCTCCACTTGGTG 38911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410795528327156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |