Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq5 132 3e-26
seq9 89.7 3e-13
>seq5
Length=873697
Score = 132 bits (146), Expect = 3e-26
Identities = 171/232 (74%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| || || | ||||||| ||| | ||| || ||||| ||||||||||| ||
Sbjct 38665 TCCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGA 38724
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| | |||| |||| ||| || || ||||| || || ||||||||||| ||
Sbjct 38725 GAGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGG 38784
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGA----ATCGGTCGATT 34337
| || ||||||||| ||||| | ||| || | |||||| |||| ||||||
Sbjct 38785 AATGCCCTCCTTGTCTTGGATCTTC-GATTT-GAC--GTTATCGATGGTATCGCTCGATT 38840
Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || |||| |||||||| |||||||||||||| ||||| |||||||||||
Sbjct 38841 CAACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 105 bits (116), Expect = 4e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| |||||||| | | || || || | |||| || ||||| || |||||||||||
Sbjct 39122 CCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGAT 39181
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| | || || | ||||||||| ||||| || | |||||||| || ||
Sbjct 39182 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGA 39241
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | ||||| ||| |||||
Sbjct 39242 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGACC 39301
Query 34343 TCCACCGTGATGGTTTTGCCGGT 34365
|| | |||||| |||||||||||
Sbjct 39302 TCAAGCGTGATAGTTTTGCCGGT 39324
Score = 86.0 bits (94), Expect = 4e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || ||| ||||| || |||||||| || || ||| | ||
Sbjct 38909 AGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTACGCCCATCT 38968
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| ||||||||||| ||||||||||| || ||||| || || | | |||||| ||
Sbjct 38969 TCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGGATACCCTCCTTATCC 39028
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | ||| | || || || || | ||| |||||
Sbjct 39029 TGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCACCTCGAGCGTAATGGTC 39088
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || | || || || || ||||||||
Sbjct 39089 TTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120
>seq9
Length=754770
Score = 89.7 bits (98), Expect = 3e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||||||||| || ||| |||| || | ||||||||| |||||
Sbjct 276182 TTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 276241
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
||| || ||||||||||| ||| | || |||||||||
Sbjct 276242 AATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 276280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323070999890240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |