Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq93 293 2e-74
seq5 131 1e-25
seq13 118 9e-22
>seq93
Length=73557
Score = 293 bits (324), Expect = 2e-74
Identities = 647/958 (68%), Gaps = 19/958 (2%)
Strand=Plus/Minus
Query 23028 AGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATA 23087
|| |||| ||||| || || ||||| || | |||||||| | || || || || |
Sbjct 32609 AGCCAAG-TTGCAAACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACA 32551
Query 23088 GATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCT 23147
| ||| | || || || | ||| |||||||||| || || ||||| | |||||
Sbjct 32550 GGTTGGAGCTGCGGATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCT 32491
Query 23148 TGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAG 23207
|||| |||||| | || | || ||||| ||| | ||||| ||| || ||| |
Sbjct 32490 TGTAAAGCATGAAAGGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCT 32431
Query 23208 TCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCG 23266
|||| || | || ||| | || | | ||| || | ||| || || || | | |
Sbjct 32430 TCTGGGCACGCACT-GTCTCGCGGCCACGGCCCTCCTTCTCATAGCGGTGATAGAGCTCC 32372
Query 23267 TCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTC 23326
|| || || ||||||| ||| || |||||||| | | | || ||||| || ||
Sbjct 32371 TCGAACTCATCACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTC 32312
Query 23327 CACATTGAGTCATTTTCA---ACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAG 23383
||| | | ||||| || || |||| || ||||| || ||||| |||||||||
Sbjct 32311 CACTC---GCCGTTTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAG 32255
Query 23384 AACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCC 23443
|| || |||||||| || ||||| || |||||| |||||| | ||||| ||| |
Sbjct 32254 AAGAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCA 32195
Query 23444 AACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCG 23503
|| || || || ||||||||||||||||| | ||| || || || || | ||| |||||
Sbjct 32194 AATACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTTGTTGCCA 32135
Query 23504 CCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTG 23563
||||| |||||||| || || ||||||||||| || | ||||| || | |||||| ||
Sbjct 32134 CCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTC 32075
Query 23564 GACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAA 23623
|| | ||| | ||| | | || || | || |||| | ||| |||| || |
Sbjct 32074 GATGTACCGTTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGAGA 32015
Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683
|| || || || | | || || |||| || ||| || || || |||||||| ||
Sbjct 32014 CCAATACCGCCAGCGGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCA 31955
Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTG-CGCTTTGGGCGT 23742
|| |||||||| || || | ||| | ||| || || ||||| || || |||| ||
Sbjct 31954 TCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGG-GT 31896
Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGT 23801
| | || ||| ||||| ||| ||||| || ||||| | |||||| ||| | ||
Sbjct 31895 ACCCGCGTTGAAAAGTGTAGGGGAAGCGTGTGTGAAGTACTTCTGCGACATGTAG-TCGT 31837
Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCA 23861
| || |||||||| || || ||||| ||||| || |||| || |||||||||| ||
Sbjct 31836 ATGTCTCGATGGCCTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCA 31777
Query 23862 TGTATTGAGGTCTCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCA 23918
||| ||| || | ||| ||| | |||||| || || || ||||| || | |
Sbjct 31776 TGTGTTGTGGGCGTTCGGCAACCTT---GCCGTTGATGCGGAGGAGGTATGAGCGCTCGA 31720
Query 23919 TCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
||| || || || || | | ||||| || || || || | || |||||||| ||
Sbjct 31719 GCGTCTTGAAGCCGAAGAATTGGTAGTTGAAATCGCGGTCATAGACAATGGCCGAGTT 31662
>seq5
Length=873697
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || ||||| || |||||| | || |||||| || |
Sbjct 38892 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACCTTGGAGGTTGAATCGAGC 38833
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | |||||| || || |||||||| ||| | || || ||||||
Sbjct 38832 GATACCATCGATAACGTCAAATCGAAGATCCAAGACAAGGAGGGCATTCCACCTGACCAG 38773
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || |||||||| |||||| |||||||| || ||| | || || |||
Sbjct 38772 CAGCGTCTTATCTTCGCTGGTAAACAGCTGGAAGACGGTAGGACGCTCTCTGACTACAAC 38713
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| || || || || || || |||| ||| | || | |||||
Sbjct 38712 ATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGTCTTCGTGGCGG 38666
Score = 86.0 bits (94), Expect = 6e-12
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276
|| || || || |||||| |||| || || |||| |||| |||| | || ||| ||
Sbjct 39608 ACCGGTAAGACTATCACCCTCGAGGTGGAGTCGTCAGACACGATCGACAACGT-AAAGAG 39550
Query 31277 AGA-ATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAA 31335
| || ||||||||||||| | || ||||| |||||||| | || ||||| |||||
Sbjct 39549 CAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGCAGCGCTTGATCTTCGCCGGCAA 39490
Query 31336 ACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCA 31395
||| | || || || || |||||| ||||| || || || |||||||||||
Sbjct 39489 GCAGCTCGAGGATGGCCGTACCTTGTCCGATTACAACATCCAGAAGGAGTCGACTCTTCA 39430
Query 31396 TCTGGTACT 31404
||| || ||
Sbjct 39429 TCTTGTCCT 39421
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| |||| ||||| || || || |||| || || | ||
Sbjct 39120 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACCATTACGCTCGAGGTGGAGTCATCG 39061
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | ||||| || || ||| ||||| || | || || || |||
Sbjct 39060 GATACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCAGATCAG 39001
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|| ||||| || ||||||||||| ||||| |||||
Sbjct 39000 CAACGTCTCATTTTCGCTGGCAAGCAGTTAGAAGA 38966
>seq13
Length=704243
Score = 118 bits (130), Expect = 9e-22
Identities = 215/312 (69%), Gaps = 2/312 (1%)
Strand=Plus/Plus
Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038
|||||||||| |||||||| ||||| ||||| || ||| || | || || |||
Sbjct 439852 TCGCGTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTCGCCTCCATCTTCTGGC 439911
Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098
||||||| ||||| || ||||||||||| || || ||||||| | || ||||| ||||
Sbjct 439912 TGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCGCGTGACG 439971
Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGA-CG 58157
|||| | || || ||||| || ||||| | | |||| | | || | || | |
Sbjct 439972 AGGGCATGCACACCGATTTCGCCTGCCTCCTCTTTTCTCTCCTGAACACTCGTCCCAGCA 440031
Query 58158 CGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217
|| ||| || || ||| ||||| || || ||| | ||||| | || || | ||
Sbjct 440032 AGGAGTCG-GTCCAGGCCATCATCACTGAAGCTGTCACAATCGAGCAGGAATTCCTGACT 440090
Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277
|| || || || || ||||||| |||||| | | |||| | |||||||||
Sbjct 440091 GAGGCTCTGCCTTGCGCTCTGCTCGGCATGAACGCTACCCTCATGTGCCAATACATTGAG 440150
Query 58278 TTTGTTGCCGAC 58289
|| |||||||||
Sbjct 440151 TTCGTTGCCGAC 440162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764984691680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |