Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq93 102 1e-16 >seq93 Length=73557 Score = 102 bits (112), Expect = 1e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||||| ||||| || || || ||||||| || ||||| | ||||| || |||||||| Sbjct 33536 TTCCTGGTCCACAGTGAATTGGATGGGAGCAGAGGCGGCCATGGTACGGAGGTAGTACAT 33477 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCT 70907 ||| || ||||| ||||| |||||||| || ||||| || | ||| | | Sbjct 33476 GCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGT 33417 Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967 ||| || ||||| || || | |||||| ||| |||||||||||||| | ||| || Sbjct 33416 AGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAGGCTCCACGGTCAGC 33357 Query 70968 AGCCAT 70973 |||||| Sbjct 33356 AGCCAT 33351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137069133040