Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq93 159 5e-34
seq13 158 2e-33
>seq93
Length=73557
Score = 159 bits (176), Expect = 5e-34
Identities = 368/544 (68%), Gaps = 8/544 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|||||||| | | | ||| || | || |||||| | | ||||| || || | ||
Sbjct 32061 ACAAACGGTACATCGAATGGTCTCATTCCCATGCTCCGTGTCTACAACAACACTG-CTCG 32119
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||||| ||||| ||||| || || ||||| ||| | ||| ||||| | || || ||
Sbjct 32120 CTACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTCGCCATCTACCTCGAGCCGTG 32179
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| || || |||| ||| | || | || || ||| ||| ||||||| ||
Sbjct 32180 GCACGCTGATGTATTTGGCTTCTTGGACCTTCGTAAGAACCACGGCAAGGAAGAGGTTCG 32239
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
||| | ||| | || || || || ||| | || ||| | ||||||||||| || | ||
Sbjct 32240 TGCCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTGCAGGA 32299
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| | |||| || ||||||||| || | | ||||| || | || || ||
Sbjct 32300 AAACGGCGAGTGGACGCTGATGTGCCCCAACGAGGCTCCCGGCCTCGCGGACGTCTACGG 32359
Query 97106 CGAAGAGTTTGAGGCCAAGTA-CACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163
|| ||||| |||| || ||| | ||| ||| | |||||||| || ||||| |
Sbjct 32360 TGATGAGTTCGAGGAGCTCTATCACCG-CTATGAGAAGGAGGGCCGTGGCCGCGAGAC-A 32417
Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222
|| ||| | |||| || ||| | |||||| | ||||||| |||||||| | ||
Sbjct 32418 GTGCGTGC-CCAGAAGCTTTGGTATGCCATCCTCGAGGCTCAGACGGAGACTGGTAACCC 32476
Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282
| ||| || ||||||||| || || ||||| |||||||| | | || |||||
Sbjct 32477 TTTCATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAATCTCGGTACCAT 32536
Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342
| ||||||| |||||||| || || | |||||| || | || || ||| || ||
Sbjct 32537 CCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAGGTCGCTGT 32596
Query 97343 TTGC 97346
||||
Sbjct 32597 TTGC 32600
>seq13
Length=704243
Score = 158 bits (174), Expect = 2e-33
Identities = 568/887 (64%), Gaps = 66/887 (7%)
Strand=Plus/Plus
Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081
||| |||||||||| ||||| | || ||||| ||||| | ||||||| | ||||| |||
Sbjct 439394 TGGCAAATGTACAAGAAGGCCGAAGCATCCTTCTGGACAGCCGAAGAGATTGATCTCTCC 439453
Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141
||||| || |||| ||| | | || |||| || ||||| ||||| || |||
Sbjct 439454 AAGGATCTCCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTCTTTATCTCCCAC 439513
Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATT 125200
| | ||||| || |||| ||| ||||| ||||||||||| || || || || || ||
Sbjct 439514 GTCCTAGCCTTTTTCGCCGCCTCAGATGGCATCGTCAACGAGAACCTAGTCGA-GCGCTT 439572
Query 125201 CTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGA 125260
||| || | || || |||| | |||||| ||||| ||||| |||||||| ||
Sbjct 439573 CTCCGGCGAAGTACAAATACCCGAGGCGAGGTGCTTCTACGGCTTCCAGATCATGATGGA 439632
Query 125261 GAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT--------------- 125305
|||| | ||||| || | |||||| ||||| |||| |||||
Sbjct 439633 GAACATCCACTCAGAGACATACTCTCTGCTGATCGACACCTACATCAGTGAGCCCAAGCA 439692
Query 125306 ---------TC--------GCGATCCGCAAC-GTAA------ACAC-ATGCTCTTTA--- 125337
|| || ||| |||| |||| ||| | || ||| |
Sbjct 439693 GCGCAAGTATCTTTTCAATGCTATCGACAACAGTAAGTTGCCCCACAACGCGCTTCACAA 439752
Query 125338 -ACGC-----AATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGT 125391
|||| | || ||| || || | || || || ||||| | |||| | || |
Sbjct 439753 GACGCGTCTAACGCGTCACAGTTCCATGCATCCGCAAGAAGGCCGACTGGGCTCTGCGAT 439812
Query 125392 GGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGG 125451
||||| ||| | || || | | || || | || || || ||||| ||||| ||||
Sbjct 439813 GGATCTCTGATAAGAACTCCACCTTTGCGAACCGTCTTGTCGCGTTCGCTGCCGTCGAGG 439872
Query 125452 GCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGC 125511
| |||||||| ||| || || ||||||| ||||| ||||||||||| |||||||
Sbjct 439873 GTATCTTCTTCAGTGGTTCCTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGC 439932
Query 125512 CCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTG 125571
|||| || || | |||||| | || || || ||||||||| | ||| || || |
Sbjct 439933 CCGGCCTCACCTTCTCCAACGAGCTCATTTCGCGTGACGAGGGCATGCACACCGATTTCG 439992
Query 125572 CCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGC-AGATCCAGCGATGAAAAGGTC 125630
|| || || ||| ||| ||| || | | ||||| | || ||||
Sbjct 439993 CCTGCCTCCTCTTT--------TCT--CTCCTGAACACTCGTCCCAGCAAGGAGTCGGTC 440042
Query 125631 ATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCG 125690
||| | || || || || | || || || || || || || || | || ||
Sbjct 440043 CAGGCCATCATCACTGAAGCTGTCACAATCGAGCAGGAATTCCTGACTGAGGCTCTGCCT 440102
Query 125691 GTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGAT 125750
| || | ||||||||| | || |||||| | ||||| ||||| || || ||
Sbjct 440103 TGCGCTCTGCTCGGCATGAACGCTACCCTCATGTGCCAATACATTGAGTTCGTTGCCGAC 440162
Query 125751 CGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTC 125810
||||| || | | | | | |||| | ||||| |||| || ||||| || |||
Sbjct 440163 CGTCTGCTCTTGGCTCTCGGTAACACCAAGGTGTACAATGCCACCAACCCCTTCGACTTC 440222
Query 125811 ATGACCAGCATATCAC--TAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
||| || ||||| | | | || ||||||||||| |||||||||
Sbjct 440223 ATG--GAGAATATCTCCTTGGCTGGCAAGACCAACTTCTTCGAGAAG 440267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056847137040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |