Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq33 120 5e-23
seq75 113 7e-21
>seq33
Length=400341
Score = 120 bits (132), Expect = 5e-23
Identities = 212/321 (66%), Gaps = 55/321 (17%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| ||| || || |||||||| || ||||||||||| |||||
Sbjct 193153 GCCAAGCGCCACCGCAAGAT-TCTCCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 193095
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG------------------- 16532
||| ||||| |||||||||||||| ||||||||| | ||||
Sbjct 193094 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCAGTAAGTCACCTTCGCC 193035
Query 16533 --------------GAT--------------------TGGTCTATGAAGAGATTCGTGAT 16558
||| || |||| ||||||| |||| |
Sbjct 193034 CTACCATTGTCCAGGATCAGCACTAACATAGCCGCAGTGATCTACGAAGAGACCCGTGGT 192975
Query 16559 GTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCT 16618
|| | |||| ||||||| ||| ||| |||| |||||| || ||| |||||||||||
Sbjct 192974 GTCCTCAAGACCTTCCTCGAGAGCGTCATCCGTGATGCCGTCACCTACACCGAGCACGCC 192915
Query 16619 AAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAG 16678
|| || ||||| ||||||||| | ||| ||||||| || | || || || |||||||
Sbjct 192914 AAGCGCAAGACCGTCACCTCCCTCGATGTCGTCTACGCGCTCAAGCGCCAGGGCCGTACC 192855
Query 16679 ATTTATGGTTTTGGAAGTTAA 16699
| || ||||| || |||||
Sbjct 192854 CTCTACGGTTTCGGTGGTTAA 192834
>seq75
Length=116528
Score = 113 bits (124), Expect = 7e-21
Identities = 86/99 (87%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 13097 GCCAAGCGTCACCGAAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCTAT 13039
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||| |||||||||||||| ||||||||| ||||
Sbjct 13038 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 13000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074967766022
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |