Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq33 120 5e-23 seq75 113 7e-21 >seq33 Length=400341 Score = 120 bits (132), Expect = 5e-23 Identities = 212/321 (66%), Gaps = 55/321 (17%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| ||| || || |||||||| || ||||||||||| ||||| Sbjct 193153 GCCAAGCGCCACCGCAAGAT-TCTCCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 193095 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG------------------- 16532 ||| ||||| |||||||||||||| ||||||||| | |||| Sbjct 193094 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCAGTAAGTCACCTTCGCC 193035 Query 16533 --------------GAT--------------------TGGTCTATGAAGAGATTCGTGAT 16558 ||| || |||| ||||||| |||| | Sbjct 193034 CTACCATTGTCCAGGATCAGCACTAACATAGCCGCAGTGATCTACGAAGAGACCCGTGGT 192975 Query 16559 GTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCT 16618 || | |||| ||||||| ||| ||| |||| |||||| || ||| ||||||||||| Sbjct 192974 GTCCTCAAGACCTTCCTCGAGAGCGTCATCCGTGATGCCGTCACCTACACCGAGCACGCC 192915 Query 16619 AAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAG 16678 || || ||||| ||||||||| | ||| ||||||| || | || || || ||||||| Sbjct 192914 AAGCGCAAGACCGTCACCTCCCTCGATGTCGTCTACGCGCTCAAGCGCCAGGGCCGTACC 192855 Query 16679 ATTTATGGTTTTGGAAGTTAA 16699 | || ||||| || ||||| Sbjct 192854 CTCTACGGTTTCGGTGGTTAA 192834 >seq75 Length=116528 Score = 113 bits (124), Expect = 7e-21 Identities = 86/99 (87%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 13097 GCCAAGCGTCACCGAAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCTAT 13039 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||||||||| |||||||||||||| ||||||||| |||| Sbjct 13038 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 13000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074967766022