Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq93 351 3e-91 seq12 86.0 2e-11 >seq93 Length=73557 Score = 351 bits (388), Expect = 3e-91 Identities = 1178/1794 (66%), Gaps = 50/1794 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | |||||| | ||| || ||||| || ||||| || | ||| ||| Sbjct 31704 TTCGGCTTCAAGACGCTCGAGCGCTCATACCTCCTCCGCATCAACGGCAAGGTTGCCGAA 31763 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 ||||| || || ||| | ||||| || ||| | || ||||| || |||| | || Sbjct 31764 CGCCCACAACACATGCTGATGCGCGTGGCTGTCGGCATCCACGGCGAGGATATCGAGAAG 31823 Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568 || || || ||||| | || | | || || ||| ||||| ||||| | || ||| Sbjct 31824 GCCATCGAGACATACGA-CTAC-ATGTCGCAGAAGTACTTCACACACGCTTCCCCTACAC 31881 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||| || || || | || |||||||| || ||||| || | | ||||||| Sbjct 31882 TTTTCAACGCGGGTACCCCATCGCCTCAGATGTCGTCCTGCTTCCTCATCGACATGAAGG 31941 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || ||| || || |||| || |||||||||| |||||| | || ||||||| | Sbjct 31942 AAGACAGCATTGATGGAATCTACGATACACTTAAGACATGTGCTTTGATCTCCAAGACCG 32001 Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 | ||||| |||||| | | || | ||| ||||||| || | | |||||| | || Sbjct 32002 CTGGCGGTATTGGTCTCAACG-TGCACCGCATTCGTGCCACCGG-CTCCTACATTGGTGG 32059 Query 363747 CACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 |||| || ||| |||||||| || |||||||||| ||||| | |||| ||||| Sbjct 32060 CACAAACGG-TACATCGAATGGTCTCATTCCCATGCTCCGTGTCTACAACAACACTGCTC 32118 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | ||||||||||||||||| ||||| ||| || || || || || |||||||| Sbjct 32119 GCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTCGCCATCTACCTCGAGCCGT 32178 Query 363866 ATCATGCCGATATTTTTGAGTTTCTT-GAGCTCCGGAA-AAACACGGGAA--AAGAGGAA 363921 || || ||| | |||| | ||||| || || || || || ||||| || |||||| Sbjct 32179 GGCACGCTGATGTATTTG-GCTTCTTGGACCTTCGTAAGAACCACGGCAAGGAAGAGG-- 32235 Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981 | ||||| || || || ||||| || || ||| | | || | || |||||||| ||| Sbjct 32236 -TTCGTGCCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTG 32294 Query 363982 GAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 ||| | || || ||| | || | ||||| |||| ||| || || | || Sbjct 32295 CAGGAAAACGGCGAG---TGGACGCTGATGTGCCCCAACGAGGCTCCCGGCCTCGCGGAC 32351 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 || | ||||| || | | | || || | ||||| |||||| | || Sbjct 32352 GTCTACGGTGATGAGTTCGAGGAGCTCTATCACCGCTATGAGAAGGAGGGCCGTGGCCGC 32411 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 ||||| | | || |||||||| |||| ||||||| | || | |||| ||||| || Sbjct 32412 GAGACAGTGCGTGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCTCAGACGGAGACTGGT 32471 Query 364159 ACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 | ||||| | ||| | ||||| ||| | |||||||||||| ||||||| || | || || Sbjct 32472 A-ACCCTTTCATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAATCTCGG 32530 Query 364218 TACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 ||| | || |||| |||||| || || ||||| || || |||||||| || || ||| Sbjct 32531 TACCA-TCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAGG 32589 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-----TAAAAG-ATGGTA 364330 || || || ||| | || || | || || || |||| | || ||| ||| Sbjct 32590 TCGCTGTTTGCAACTTGGCTTCTCTTGCTCTCCCATCGTTCGTCGACTACAAGCGTGGCG 32649 Query 364331 CTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAA 364388 || ||| |||| | || | || || || | || || || | ||||| | || Sbjct 32650 AGTTCGACTTCCAGAAGCTGCACGAAGTCACTCAGGTCGTG--ACGCGTAATCTGAATAA 32707 Query 364389 GGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCG 364448 | ||||||| ||| | || || | || || ||| || | ||||| || Sbjct 32708 GATTATCGAAGTCAATCACTACCCCGTCGAAGAGGCACGTCGTAGCAACTTCCGTCACCG 32767 Query 364449 CCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCA 364506 ||| ||||| | ||||| || || ||||| || | || | ||||| || || Sbjct 32768 CCCTATTGGCATGGGTGTGCAAGGTCTCGCCGATGCCTTCCT--TGCTCTGCGCCTGCCA 32825 Query 364507 TTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCC 364566 || || || || || ||| || || | ||||||| || || || || ||| Sbjct 32826 TTCGAATCACCGGAGGCTAAGAAACTCAACATTCAGATCTTCGAGACCATCTACCATGCT 32885 Query 364567 GCAATGACTGCTTCGTGTGATTTGGCAAA-AACCAAGGGAAAGTACTCTACTTATGAGGG 364625 || | || |||| || || | ||||| | | || | || || || ||||| Sbjct 32886 GCTCTCACCTCTTCCTGCGACATTGCAAAGGAACTCGGCCCA-TATAAGACATACGAGGG 32944 Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685 || ||| |||| || || | |||| | |||| | ||||| |||||||| | | || Sbjct 32945 CTCGCCTGTTTCTCAAGGCATCCTCCAATATGATATGTGGAACGTCACGCCTACCGACCT 33004 Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745 ||| |||||| |||| || || |||||||| |||||||||||| | Sbjct 33005 CTGGGACTGGGCGTCGCTGAAGGAGAAGATTGCTCAGCATGGTGTCCGCAACTCCCTCCT 33064 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 | || ||||||||||| || || || | |||||||| || ||||||||||||||||| Sbjct 33065 CATTGCTCCCATGCCCACTGCGTCCACCTCCCAGATCCTTGGCAACAACGAGTGCTTCGA 33124 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 |||| || || | || || || || || || | || || |||| ||| || || Sbjct 33125 GCCGTACACCTCAAACATCTACTCCCGTCGAGTCCTCGCTGGTGAGTTTCAGGTTGTCAA 33184 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925 | || ||||||| || |||| || ||||| || | |||||||||| Sbjct 33185 CCCATGGCTGCTCAAGGACCTCGTCGACATGGGCTTGTGGTCCGAGAACATGAAGAACCG 33244 Query 364926 TATCATCGCCGCTAATGGTTCTGT-GCAGAACAT-TCCAGGATTTCC-AGAAGATCTGAA 364982 ||||||||||| ||| ||| | ||| | || ||| || || || ||| | || Sbjct 33245 TATCATCGCCGAGGGTGGCTCTATCGCA-AGGATCCCCAACATCCCCGAGGAGACC--AA 33301 Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGA 365042 | | | ||||| || || ||||| || || ||||||| | ||| | ||||| || || Sbjct 33302 GACCCTATACAAGACTGTCTGGGAGATCTCTCAGCGAACTATTATTCAGATGGCTGCTGA 33361 Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTC 365102 || || || || ||| || ||||| | ||| | ||||| |||| ||| Sbjct 33362 CCGTGGAGCCTTCATCGACCAATCTCAGTCTCTAAACATCCACATGAAGGAGCCTACCAT 33421 Query 365103 CGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| | || |||||||| ||| ||| ||||| ||| || ||||| || Sbjct 33422 GGGCAAGATCACCTCCATGCACTTCGCCGGATGGAAGCTCGGACTAAAGACGGG 33475 >seq12 Length=714740 Score = 86.0 bits (94), Expect = 2e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930 ||| |||| || || || || ||| ||| ||||| |||||| || | || ||| Sbjct 346353 GTTGCGAACAGTCCCATCGTATTTGACCATGACGTCTTCGAGTGCCTTGACTAAACGACG 346412 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 |||||||| ||| | | |||||| || || || ||||| | |||||||||||| || | Sbjct 346413 TTGGATGTATCCAGTCTCTGCAGTCTTCACTGCAGTATCGATGAGACCTTCACGACCAGC 346472 Query 65991 CATTGCAGAAAAGAAAAACTCAGTCGGTTGTAGACCA 66027 ||| || |||||| ||||| | |||| |||||| Sbjct 346473 CATAGCGTGAAAGAAGAACTCGGACGGTGTGAGACCA 346509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349358398628