Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq93 174 1e-38
seq44 111 1e-19
seq5 105 6e-18
seq9 93.3 4e-14
>seq93
Length=73557
Score = 174 bits (192), Expect = 1e-38
Identities = 933/1456 (64%), Gaps = 55/1456 (4%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||||||||| || || | || ||||| | || | ||| || ||| | ||
Sbjct 33184 TTGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGAGGTGTACGGC 33125
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||||| ||||| || | ||| | || ||||||||| || |
Sbjct 33124 TCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCATGGGAGCAATG 33065
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | || |||| || | ||||| |||| |||| |||||
Sbjct 33064 AGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGCCCAGTCCCAG 33005
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCG----CTGGCGGG 145293
|| || ||| | |||| |||||| || || || | ||||| | | |||| |
Sbjct 33004 AGGTCGGTAGGCGTGACGTTCCACATATCATATTGGAGGATGCCTTGAGAAACAGGCGAG 32945
Query 145294 GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCC 145351
| || | | | || || || || |||| || || | ||||| |
Sbjct 32944 CC---CTCGTATGT--CT-TATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAGAGGTG 32891
Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTC 145411
||||| | || || |||||| || || ||||||| | | || || || |
Sbjct 32890 AGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTC--CGGTG 32833
Query 145412 --TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGA 145469
||| | |||| |||||| | || ||||||||||| || || | |||| ||| |
Sbjct 32832 ATTCGAATGGCAGGCGCAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATGCCAA 32773
Query 145470 TGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGA 145529
| || || || | |||||| | ||| |||| || || |||| ||||
Sbjct 32772 TAGGGCGGTGACGGAAGTTGCTACGACGTGCCTCTTCGACGGGGTAGTGATTGACTTCGA 32713
Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589
|||| ||||||| || ||| || |||| || | | ||| ||| | ||||| |
Sbjct 32712 TAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAGTCGA 32653
Query 145590 AC---CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAA 145646
|| | | || || |||| | || | | || || | || ||||| || ||||
Sbjct 32652 ACTCGCCACGCTTGTAGTCGACGA-AC-GATGG-GAGAGCAAGAGAAGCCAAGTTGCAAA 32596
Query 145647 CTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTG 145705
| || ||| || |||| || |||| | | |||||| | ||||| ||| | |
Sbjct 32595 CAGCGACCTCATCAGGCG-CGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGG 32537
Query 145706 ATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTAC 145765
||||| || ||||| | ||| || || || | |||||| || |||||||| |||||| |
Sbjct 32536 ATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAA 32477
Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGC 145822
|| ||||||||| ||| | ||| | ||| | | | ||| | ||| ||||||
Sbjct 32476 GGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCA---TACCAAAGCTTCTGGGCACGC 32420
Query 145823 ACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCC-TG-TAGAGCTCCTCAAACGCGG 145880
|| || || |||||||| |||| || | || ||||||||||| ||| |
Sbjct 32419 ACTGTCTCGCGGCCACGGCCCTC--CTTCTCATAGCGGTGATAGAGCTCCTCGAACTCAT 32362
Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940
||||||| || | ||||||||| || |||||| |||||||||| ||| ||||||
Sbjct 32361 CACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGT 32302
Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCG 146000
| | | || |||| ||| || | ||| || | |||||| ||||| | | |||||| |
Sbjct 32301 TTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGG 32242
Query 146001 CTTTGCAATCCTCAGC--ACCCATGTTTCGCTTCAAA--TTAAGCACACTATAGATGTCC 146056
| | | |||| | || || ||| | | || | | | | | | | ||
Sbjct 32241 C---ACGAACCTCTTCCTTGCCGTGGTTC-TTACGAAGGTCCAAGAAGCCAAATACATCA 32186
Query 146057 GCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCC 146113
||||||||||| || | |||| ||||| || ||| || ||||||||||||||
Sbjct 32185 GCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTTGTTGCCACCCTGGTCG 32126
Query 146114 ACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCG 146173
|||| || | ||||||| |||| || | |||||| || || | | | |||
Sbjct 32125 ACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCG 32066
Query 146174 TTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCG 146233
|| || || || |||| || || | || || || || | || | ||||
Sbjct 32065 TTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGAGACCAATACCG 32006
Query 146234 CCGCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCT 146292
|| || |||||| || || || ||| || || |||||||| || ||||||||
Sbjct 32005 CCAGCGGTCTTGGAGATCAAAGCACATGTC-TTAAGTGTATCGTAGATTCCATCAATGCT 31947
Query 146293 ATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCC 146350
|| |||| ||| ||| || ||||| || ||||||| | | || || |||||
Sbjct 31946 GTCTTCCTTC--ATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCG 31889
Query 146351 GAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGC-TCAT-CATCCGATACGTTT 146408
||| | || ||| ||||| || || | ||| || ||| | || || || |
Sbjct 31888 TTGAAAAGTGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCG-TATGTCT 31831
Query 146409 CGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTT 146468
|||| || | | || || ||||| || ||||| | ||| |||||||| ||||||||||
Sbjct 31830 CGATGGCCTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTT 31771
Query 146469 GGGGCCGCTCCGCCAC 146484
| || || || || ||
Sbjct 31770 GTGGGCGTTCGGCAAC 31755
>seq44
Length=299893
Score = 111 bits (122), Expect = 1e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || || || | |||||||||||| || |||||||| |||
Sbjct 198072 CCACCACGCAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 198013
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| ||
Sbjct 198012 AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGGGGGA 197953
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 197952 ATGCCCTCCTTGTC 197939
>seq5
Length=873697
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | || || || | ||| | ||||||||||| || |||||||||||| |
Sbjct 39406 CCACCGCGAAGGCGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAC 39465
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| ||||||||||| ||| |||| || |||||||| || || ||
Sbjct 39466 AAGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGA 39525
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||| | | || | || || | ||||| |
Sbjct 39526 ATGCCTTCCTTGTCCTGGATCTTGCTCTTTACGTTGTCGATCGTGTCTGACGACTCCACC 39585
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | || ||||||||
Sbjct 39586 TCGAGGGTGATAGTCTTACCGGT 39608
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| || || | || |||||||| ||||||||||| ||
Sbjct 38666 CCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAG 38725
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | ||| || ||||| || || ||| |||| | |||||||||||| || ||
Sbjct 38726 AGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGA 38785
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| |||| | || | |||||| | || || |
Sbjct 38786 ATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACC 38845
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || ||||| ||||| || ||||| ||||||||
Sbjct 38846 TCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | || || ||||| ||||| ||||| ||
Sbjct 38894 CCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAG 38953
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || ||| || |||| ||||||||| ||| | || | ||| ||||| || ||||||
Sbjct 38954 AGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGG 39013
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || || ||| ||||| | || | ||||| | ||||| |
Sbjct 39014 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCACC 39073
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| ||| || || || | || || ||||||||||||||
Sbjct 39074 TCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| || | || | ||| | || |||||||| || || ||||| |||
Sbjct 39122 CCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGAT 39181
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| ||||||||||| ||| |||| || |||||||| || || ||
Sbjct 39182 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGA 39241
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||| | | || | ||||||| |||||||
Sbjct 39242 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGACC 39301
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | || | ||||| |||||
Sbjct 39302 TCAAGCGTGATAGTTTTGCCGGT 39324
>seq9
Length=754770
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || || || | ||||| ||||| || |||||||| |||
Sbjct 276147 CCACCACGGAGACGGAGGACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGAG 276206
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| | || | |||||||||||||| ||
Sbjct 276207 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 276266
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 276267 ATGCCCTCCTTGTC 276280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011301359360
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