Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq93 174 1e-38 seq44 111 1e-19 seq5 105 6e-18 seq9 93.3 4e-14 >seq93 Length=73557 Score = 174 bits (192), Expect = 1e-38 Identities = 933/1456 (64%), Gaps = 55/1456 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||||||||| || || | || ||||| | || | ||| || ||| | || Sbjct 33184 TTGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGAGGTGTACGGC 33125 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||| ||||| || | ||| | || ||||||||| || | Sbjct 33124 TCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCATGGGAGCAATG 33065 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | || |||| || | ||||| |||| |||| ||||| Sbjct 33064 AGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGCCCAGTCCCAG 33005 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCG----CTGGCGGG 145293 || || ||| | |||| |||||| || || || | ||||| | | |||| | Sbjct 33004 AGGTCGGTAGGCGTGACGTTCCACATATCATATTGGAGGATGCCTTGAGAAACAGGCGAG 32945 Query 145294 GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCC 145351 | || | | | || || || || |||| || || | ||||| | Sbjct 32944 CC---CTCGTATGT--CT-TATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAGAGGTG 32891 Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTC 145411 ||||| | || || |||||| || || ||||||| | | || || || | Sbjct 32890 AGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTC--CGGTG 32833 Query 145412 --TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGA 145469 ||| | |||| |||||| | || ||||||||||| || || | |||| ||| | Sbjct 32832 ATTCGAATGGCAGGCGCAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATGCCAA 32773 Query 145470 TGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGA 145529 | || || || | |||||| | ||| |||| || || |||| |||| Sbjct 32772 TAGGGCGGTGACGGAAGTTGCTACGACGTGCCTCTTCGACGGGGTAGTGATTGACTTCGA 32713 Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589 |||| ||||||| || ||| || |||| || | | ||| ||| | ||||| | Sbjct 32712 TAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAGTCGA 32653 Query 145590 AC---CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAA 145646 || | | || || |||| | || | | || || | || ||||| || |||| Sbjct 32652 ACTCGCCACGCTTGTAGTCGACGA-AC-GATGG-GAGAGCAAGAGAAGCCAAGTTGCAAA 32596 Query 145647 CTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTG 145705 | || ||| || |||| || |||| | | |||||| | ||||| ||| | | Sbjct 32595 CAGCGACCTCATCAGGCG-CGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGG 32537 Query 145706 ATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTAC 145765 ||||| || ||||| | ||| || || || | |||||| || |||||||| |||||| | Sbjct 32536 ATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAA 32477 Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGC 145822 || ||||||||| ||| | ||| | ||| | | | ||| | ||| |||||| Sbjct 32476 GGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCA---TACCAAAGCTTCTGGGCACGC 32420 Query 145823 ACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCC-TG-TAGAGCTCCTCAAACGCGG 145880 || || || |||||||| |||| || | || ||||||||||| ||| | Sbjct 32419 ACTGTCTCGCGGCCACGGCCCTC--CTTCTCATAGCGGTGATAGAGCTCCTCGAACTCAT 32362 Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940 ||||||| || | ||||||||| || |||||| |||||||||| ||| |||||| Sbjct 32361 CACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGT 32302 Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCG 146000 | | | || |||| ||| || | ||| || | |||||| ||||| | | |||||| | Sbjct 32301 TTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGG 32242 Query 146001 CTTTGCAATCCTCAGC--ACCCATGTTTCGCTTCAAA--TTAAGCACACTATAGATGTCC 146056 | | | |||| | || || ||| | | || | | | | | | | || Sbjct 32241 C---ACGAACCTCTTCCTTGCCGTGGTTC-TTACGAAGGTCCAAGAAGCCAAATACATCA 32186 Query 146057 GCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCC 146113 ||||||||||| || | |||| ||||| || ||| || |||||||||||||| Sbjct 32185 GCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTTGTTGCCACCCTGGTCG 32126 Query 146114 ACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCG 146173 |||| || | ||||||| |||| || | |||||| || || | | | ||| Sbjct 32125 ACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCG 32066 Query 146174 TTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCG 146233 || || || || |||| || || | || || || || | || | |||| Sbjct 32065 TTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGAGACCAATACCG 32006 Query 146234 CCGCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCT 146292 || || |||||| || || || ||| || || |||||||| || |||||||| Sbjct 32005 CCAGCGGTCTTGGAGATCAAAGCACATGTC-TTAAGTGTATCGTAGATTCCATCAATGCT 31947 Query 146293 ATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCC 146350 || |||| ||| ||| || ||||| || ||||||| | | || || ||||| Sbjct 31946 GTCTTCCTTC--ATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCG 31889 Query 146351 GAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGC-TCAT-CATCCGATACGTTT 146408 ||| | || ||| ||||| || || | ||| || ||| | || || || | Sbjct 31888 TTGAAAAGTGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCG-TATGTCT 31831 Query 146409 CGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTT 146468 |||| || | | || || ||||| || ||||| | ||| |||||||| |||||||||| Sbjct 31830 CGATGGCCTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTT 31771 Query 146469 GGGGCCGCTCCGCCAC 146484 | || || || || || Sbjct 31770 GTGGGCGTTCGGCAAC 31755 >seq44 Length=299893 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | |||||||||||| || |||||||| ||| Sbjct 198072 CCACCACGCAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 198013 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 198012 AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGGGGGA 197953 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 197952 ATGCCCTCCTTGTC 197939 >seq5 Length=873697 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||||||||||| || |||||||||||| | Sbjct 39406 CCACCGCGAAGGCGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAC 39465 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| || |||||||| || || || Sbjct 39466 AAGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGA 39525 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | || || | ||||| | Sbjct 39526 ATGCCTTCCTTGTCCTGGATCTTGCTCTTTACGTTGTCGATCGTGTCTGACGACTCCACC 39585 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | || |||||||| Sbjct 39586 TCGAGGGTGATAGTCTTACCGGT 39608 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | || |||||||| ||||||||||| || Sbjct 38666 CCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAG 38725 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || ||||| || || ||| |||| | |||||||||||| || || Sbjct 38726 AGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGA 38785 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| |||| | || | |||||| | || || | Sbjct 38786 ATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACC 38845 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 38846 TCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | || || ||||| ||||| ||||| || Sbjct 38894 CCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAG 38953 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || ||| || |||| ||||||||| ||| | || | ||| ||||| || |||||| Sbjct 38954 AGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGG 39013 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || ||| ||||| | || | ||||| | ||||| | Sbjct 39014 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCACC 39073 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || | || || |||||||||||||| Sbjct 39074 TCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || | || | ||| | || |||||||| || || ||||| ||| Sbjct 39122 CCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGAT 39181 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| || |||||||| || || || Sbjct 39182 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGA 39241 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||| | | || | ||||||| ||||||| Sbjct 39242 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGACC 39301 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | || | ||||| ||||| Sbjct 39302 TCAAGCGTGATAGTTTTGCCGGT 39324 >seq9 Length=754770 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||||| ||||| || |||||||| ||| Sbjct 276147 CCACCACGGAGACGGAGGACCAAGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGAG 276206 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| | || | |||||||||||||| || Sbjct 276207 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 276266 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 276267 ATGCCCTCCTTGTC 276280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011301359360