Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq13 109 1e-18
seq16 93.3 9e-14
>seq13
Length=704243
Score = 109 bits (120), Expect = 1e-18
Identities = 269/403 (67%), Gaps = 10/403 (2%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| ||| ||||| ||||||||||||||||||||| |||
Sbjct 440263 TCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCCATGAAGTCGAAGGGGTTGGTG 440204
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
||||||||| ||||| | || || || | || | ||||| || || ||||| |
Sbjct 440203 GCATTGTACACCTTGGTGTTACCGAGAGCCAAGAGCAGACGGTCGGCAACGAACTCAATG 440144
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
|| || | ||| || || ||||||||| | || | ||||| | |||||| | |
Sbjct 440143 TATTGGCACATGAGGGTAGCGTTCATGCCGAGCAGAGCGCAAGGCAGAGCCTCAGTCAGG 440084
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACC----TGTGCCAGAGA 251798
||||||| ||| | | || || || | || |||| ||| | | | ||
Sbjct 440083 AATTCCTGCTCGATTGTGACAGCTTCAGTGATGATGGCCTGGACCGACTCCTTGCTGGGA 440024
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857
| | |||| ||| || | |||| || || ||| | | ||||| |||||||
Sbjct 440023 C-GAGTGTT---CAGGAGAGAAAAGAGGAGGCAGGCGAAATCGGT-GTGCATGCCCTCGT 439969
Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917
| || |||| ||||||||| | ||||| ||||| | || || ||| | ||||
Sbjct 439968 CACGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCGCGCTTCTTCAGCC 439909
Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960
||||||| | | ||||| ||| ||| | | |||||||||
Sbjct 439908 AGAAGATGGAGGCGAAGGAACCACTGAAGAAGATACCCTCGAC 439866
>seq16
Length=624767
Score = 93.3 bits (102), Expect = 9e-14
Identities = 188/276 (68%), Gaps = 11/276 (4%)
Strand=Plus/Minus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || ||| |||| || ||||||||||||||||| || | |||| ||||| || ||
Sbjct 580397 GTCGGCTCTTTGTCTGGAGGTTGGAAGATGAAGCTAGCTTTGGCTCGTGCCATGCTCATG 580338
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
| ||||||||||| || || || || || ||||| || |||| | |||| || |||
Sbjct 580337 AGGGCCGATGTCCTGCTTCTCGACGAACCTACCAATCATTTGGATGTCGCCAATGTTGCC 580278
Query 279816 TGGCTAGTGTCCTACCT----AACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCA 279871
||||||| | || || || || | | ||| | || | || || || ||
Sbjct 580277 TGGCTAGAGCAATATCTGCAGAAGCACACCG-AGA---TCACTAGTTTGATCGTTTCCCA 580222
Query 279872 CGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAA 279931
|||||| || ||||| || || || ||| | | |||| ||||| ||||| || |||
Sbjct 580221 CGACTCCGGTTTCCTCGACGCTGTTTGCACAGACATCTACCACTACGAGCAGAA---GAA 580165
Query 279932 GCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGT 279967
||| | ||| |||||||| ||| |||||
Sbjct 580164 GCTGGTCTGCTACAAGGGCAACCTTGCTGACTTCGT 580129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027833455033614
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |