Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq5 192 1e-43
seq13 129 1e-24
>seq5
Length=873697
Score = 192 bits (212), Expect = 1e-43
Identities = 185/235 (79%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
||| | ||| || ||||| || | |||||||| ||||| ||||| || || ||||| ||
Sbjct 38659 TTACTGTCCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTA 38718
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
|| ||||| ||||| || ||||| | ||| || || ||||| || || | || |||||
Sbjct 38719 GTCAGAGAGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTC 38778
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-G 68406
||||||||||| ||||||||||| ||||| | |||||| |||||||| || ||| |
Sbjct 38779 AGGTGGAATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATC-GCTCG 38837
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || |||||||||||||| || || ||||| ||||| ||||| ||||||||
Sbjct 38838 ATTCAACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| |||||||| || || || || || || || |||
Sbjct 38894 CCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAG 38953
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||||||||||||| || ||||| ||||| | ||| || || || ||
Sbjct 38954 AGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGG 39013
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || |||||||| | ||||||| |||||||| || | ||| || ||
Sbjct 39014 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCACC 39073
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || ||||| || || || | ||||||||||| ||||||||
Sbjct 39074 TCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120
Score = 131 bits (144), Expect = 3e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||||||||| | || | || || || ||||| || |||||||| ||||||||
Sbjct 39406 CCACCGCGAAGGCGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAC 39465
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | |||||| |||||||| || | | || || ||||| |||
Sbjct 39466 AAGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGA 39525
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| ||| ||| ||||| ||||||| || || ||
Sbjct 39526 ATGCCTTCCTTGTCCTGGATCTTGCTCTTTACGTTGTCGATCGTGTCTGACGACTCCACC 39585
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | |||||| || || || ||||
Sbjct 39586 TCGAGGGTGATAGTCTTACCGGTGA 39610
Score = 93.3 bits (102), Expect = 8e-14
Identities = 136/187 (73%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 177072 AGACCGA-GAATTTGTTTGATGGCAGTAATCTCGGCGTTGTTAGTAATACTAGAC-ACAG 177129
||||| | |||||| ||||||| |||||||||||| || |||| || | | ||||
Sbjct 263705 AGACCCATGAATTT-TTTGATGTTTTGAATCTCGGCGTTCTTCATAAT-CTGGTCGACAG 263648
Query 177130 ACGCATCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGAC 177189
||| || || ||||| || ||||||||||| | ||||| | |||| | ||||| ||
Sbjct 263647 TCGCGTCTCGAACATTAAGGAGCTTACCACGCAAAGGGAAGACTCCGAAAAGATCCTGAT 263588
Query 177190 CCACGACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATGA 177249
|| |||||| | ||||| ||||||| ||| || || ||||| || | |||||
Sbjct 263587 TTACAACAGCACGTCCAGCCAAGGCAAGCACACTGGCTGACTCTCCCTCGGTGAGAATGA 263528
Query 177250 GCGTGCA 177256
| |||||
Sbjct 263527 GGGTGCA 263521
>seq13
Length=704243
Score = 129 bits (142), Expect = 1e-24
Identities = 296/441 (67%), Gaps = 10/441 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 440300 CATGACACCAGCCTTCTGGTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGC 440241
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
| ||| || |||||||||||| |||||||| ||| || ||||| || |||
Sbjct 440240 CAAGGAGATATTCTCCATGAAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACC 440181
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || || | ||||| || |||||||| ||||| |||| ||| ||| | |||
Sbjct 440180 GAGAGCCAAGAGCAGACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTT 440121
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||| | || ||| || | || || | ||| |||| ||| | | ||| ||
Sbjct 440120 CATGCCGAGCAGAGCGCAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGC 440061
Query 10175 TTCCTCGACGATGCTCTTTACC----ACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230
||| || |||| || ||| | | ||||| | ||||| ||| |||
Sbjct 440060 TTCAGTGATGATGGCCTGGACCGACTCCTTGCTGGGAC-GAGTGTTCAGGAG---AGAAA 440005
Query 10231 ACAGGA-GCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289
| |||| || | ||| | | ||| | ||||||||| || |||| |||||||||
Sbjct 440004 AGAGGAGGCAGGCGAAATCGGT-GTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAG 439946
Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349
|| || ||||||||||| || || || ||||||||| |||| | ||| || ||
Sbjct 439945 AAGGTGAGGCCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCA 439886
Query 10350 GAGAACAGAAGACCCTCCACG 10370
||| | | |||||| |||
Sbjct 439885 CTGAAGAAGATACCCTCGACG 439865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619473848880
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