Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 145 2e-29 seq13 96.9 8e-15 >seq5 Length=873697 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 ||||| || || || | ||| || | || | ||| || || || || || ||||| Sbjct 38663 TGTCCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCA 38722 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | |||||| | |||||||| | ||||| || |||||||| |||||||| || | | Sbjct 38723 GAGAGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGT 38782 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || || ||||| |||| ||| ||||| || || | |||||||||||| Sbjct 38783 GGAATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCA 38842 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| ||||| |||||||| ||||| |||||||| Sbjct 38843 ACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | |||| ||| || || ||||| ||||| | | Sbjct 38894 CCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAG 38953 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || || || |||||||| || || || ||||| || ||||| || ||| ||||| Sbjct 38954 AGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGA---TCTGGA 39010 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || |||||||| || |||| || ||||| || || | ||| || || Sbjct 39011 GGGATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCC 39070 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| || ||||| || |||| ||||||||||| |||||||| Sbjct 39071 ACCTCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120 >seq13 Length=704243 Score = 96.9 bits (106), Expect = 8e-15 Identities = 167/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157 ||||| || |||| ||| | || ||| | ||| ||| | || || || || |||| Sbjct 440058 GAAGCTGTCACAATCGAGCAGGAATTCCTGACTGAGGCTCTGCCTTGCGCTCTGCTCGGC 440117 Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCA 269217 ||||| || |||||| ||||| || || ||||| || || ||| | || ||| Sbjct 440118 ATGAACGCTACCCTCATGTGCCAATACATTGAGTTCGTTGCCGACCGTCTGCTCTTGGCT 440177 Query 269218 CTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCG 269277 |||||| | || ||||||||| | | || ||||||| ||| ||||| || || Sbjct 440178 CTCGGTAACACCAAGGTGTACAATGCCACCAACCCCTTCGACTTCATGGAGAATATCTCC 440237 Query 269278 CTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTA 269337 | | || ||||| ||||||||||| ||||| || ||||||| || ||||||| Sbjct 440238 TTGGCTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCAGAAGGCTGGTGTC 440297 Query 269338 ATG 269340 ||| Sbjct 440298 ATG 440300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650560962212