Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 2e-29
seq13 96.9 8e-15
>seq5
Length=873697
Score = 145 bits (160), Expect = 2e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
||||| || || || | ||| || | || | ||| || || || || || |||||
Sbjct 38663 TGTCCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCA 38722
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| |||||| | |||||||| | ||||| || |||||||| |||||||| || | |
Sbjct 38723 GAGAGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGT 38782
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || || || ||||| |||| ||| ||||| || || | ||||||||||||
Sbjct 38783 GGAATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCA 38842
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| ||||| ||||| |||||||| ||||| ||||||||
Sbjct 38843 ACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | |||| ||| || || ||||| ||||| | |
Sbjct 38894 CCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAG 38953
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
|| || || || |||||||| || || || ||||| || ||||| || ||| |||||
Sbjct 38954 AGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGA---TCTGGA 39010
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| || || |||||||| || |||| || ||||| || || | ||| || ||
Sbjct 39011 GGGATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCC 39070
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||||||| || ||||| || |||| ||||||||||| ||||||||
Sbjct 39071 ACCTCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120
>seq13
Length=704243
Score = 96.9 bits (106), Expect = 8e-15
Identities = 167/243 (69%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157
||||| || |||| ||| | || ||| | ||| ||| | || || || || ||||
Sbjct 440058 GAAGCTGTCACAATCGAGCAGGAATTCCTGACTGAGGCTCTGCCTTGCGCTCTGCTCGGC 440117
Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCA 269217
||||| || |||||| ||||| || || ||||| || || ||| | || |||
Sbjct 440118 ATGAACGCTACCCTCATGTGCCAATACATTGAGTTCGTTGCCGACCGTCTGCTCTTGGCT 440177
Query 269218 CTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCG 269277
|||||| | || ||||||||| | | || ||||||| ||| ||||| || ||
Sbjct 440178 CTCGGTAACACCAAGGTGTACAATGCCACCAACCCCTTCGACTTCATGGAGAATATCTCC 440237
Query 269278 CTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTA 269337
| | || ||||| ||||||||||| ||||| || ||||||| || |||||||
Sbjct 440238 TTGGCTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCAGAAGGCTGGTGTC 440297
Query 269338 ATG 269340
|||
Sbjct 440298 ATG 440300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179650560962212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |