Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 102 2e-16
seq13 95.1 3e-14
>seq5
Length=873697
Score = 102 bits (112), Expect = 2e-16
Identities = 350/541 (65%), Gaps = 10/541 (2%)
Strand=Plus/Minus
Query 297236 TTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATT 297295
|| || | ||| || | |||||| | | ||||| | || |||||| ||||||||
Sbjct 264761 TTCTCGATGATCTCCATGGGATTGAAGTTGGGGATCTCAGAGCTCCAACCAGTACCGATA 264702
Query 297296 CCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATC 297355
|| || || ||||| | ||||| | |||| || || ||||| ||| |||||||||
Sbjct 264701 CCGCTGGAGCCATTGATGAGAATCGTTGGAAGGACCGGAACATACATCTCAGGTTCGATC 264642
Query 297356 TTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACGAAAACCTGT 297415
|||| ||| ||| | ||||||||| ||| ||| || | | ||||| ||
Sbjct 264641 TTGTGACCATCAGATTCGCCATATTTCAGGAGAGCATCATCATGAGCATGGAAAATTCGT 264582
Query 297416 CGAGTCTGAGGGT-TCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACC 297474
|| | | | ||| || |||| | ||||| | || || ||| ||| |||||
Sbjct 264581 CGTG-CGAACGGTGATAGACGTGTGTAGATATACCTAGCGCTGGCGGCATCGGCGCCACC 264523
Query 297475 CTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGAC 297534
|| | | ||||||||| | ||| || ||| |||||||||| || |||||
Sbjct 264522 CTTAAGGCGCGAACCGAAGTTGCCACTAGGTTCCAAGTAGTTGATGTTGTTAGAACCGAC 264463
Query 297535 ATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGC 297594
| | ||||||||| || ||||| ||||||| || ||||| || || || |
Sbjct 264462 GAAGTTCTGTGCAAGCCCAACAATGGTGCCTTGCATTGACGCTTCACCGTGAGCGTAATC 264403
Query 297595 GCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCG 297654
| || | | ||| ||||| || | | ||||| ||||| || | | || ||
Sbjct 264402 GGTAGAGCCAGAAACTGAACCGGCGAGTTCAACCACCTTGACGTCCTTCTTGATGTTTCG 264343
Query 297655 CTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGG 297714
| |||| | ||| | |||||||| ||| || || | |||||| | ||||| ||
Sbjct 264342 CCTGAAGCAAGTATAAAGGACTTTCCGCTGACCGGGCTTTAGACCATCTATAACCGAGGG 264283
Query 297715 AATGCTTCGTTCCAGATCGTACCGC----GAGAACAAAATAAGTTCCTTGTCGATGAAGT 297770
||| ||| ||||| || | || ||||| | ||| | ||||||| || ||| |
Sbjct 264282 AATAGATCG---CAGATTGT-CAGCCATAGAGAAGAGAATGAACTCCTTGTTGACGAAAT 264227
Query 297771 C 297771
|
Sbjct 264226 C 264226
>seq13
Length=704243
Score = 95.1 bits (104), Expect = 3e-14
Identities = 172/252 (68%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| ||||| || || ||| |||||||| | || ||| | || |||
Sbjct 440049 ATCATCACTGAAGCTGTCACAATCGAGCAGGAATTCCTGACTGAGGCTCTGCCTTGCGCT 440108
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | ||||||||| || |||||| | || ||||| || ||||| |||||||| |
Sbjct 440109 CTGCTCGGCATGAACGCTACCCTCATGTGCCAATACATTGAGTTCGTTGCCGACCGTCTG 440168
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
|| | || || ||| | || |||||||| ||| |||||||| | ||| ||||||
Sbjct 440169 CTCTTGGCTCTCGGTAACACCAAGGTGTACAATGCCACCAACCCCTTCGACTTCATGGAG 440228
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
|| || | || || || ||||||||||| ||||| || | || || ||
Sbjct 440229 AATATCTCCTTGGCTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCAGAAG 440288
Query 243742 CCTGGTGTGATG 243753
||||||| |||
Sbjct 440289 GCTGGTGTCATG 440300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102876410814900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |