Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq93 356 3e-93 seq13 120 4e-22 >seq93 Length=73557 Score = 356 bits (394), Expect = 3e-93 Identities = 1136/1742 (65%), Gaps = 30/1742 (2%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| |||||||| || || ||||||| | | ||||| |||| Sbjct 33490 CGGAGGTAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTG 33431 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | || || | |||| || ||| | | || ||||| ||||||||| Sbjct 33430 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAG 33371 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACA--TCCTTCATCTTGATTTCCCACACAGTTC 113774 |||||| || || ||||| | ||| | | || | | ||| ||||| ||||| Sbjct 33370 GCTCCACGGTCAGCAGCCATCTGAATAATAGTTCGCTGAGA--GATCTCCCAGACAGTCT 33313 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834 |||| ||| |||| | || || ||||| | ||| || ||| ||||||||| | Sbjct 33312 TGTATAGGGTCTTGGTCTCCTCGGGGATGTTGGGGATCCTTGCGATAGAGCCACCCTCGG 33253 Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894 || || | | |||||| | || ||||| | || || | ||| |||| | | Sbjct 33252 CGATGATACGGTTCTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGAGCA 33193 Query 113895 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 113952 | ||| | ||||||| ||||||||| |||||| || | ||||| || | Sbjct 33192 GCCATGGGT--TGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGA 33135 Query 113953 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCAT 114012 ||||| ||||| |||||||| ||||| || | ||| |||| |||||| || |||||||| Sbjct 33134 GGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCAT 33075 Query 114013 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTC 114072 ||| || ||||| ||| ||| |||| ||| | | ||| ||||| || | | Sbjct 33074 GGGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGC 33015 Query 114073 CCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 114132 |||||| || | | | | | | |||||||||| | |||||||| ||||| || Sbjct 33014 CCAGTCCCAGAGGTCGGTAGGCGTGACGTTCCACATATCATATTGGAGGATGCCTTGAGA 32955 Query 114133 GGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 114192 | ||||| ||||| |||||| |||||||| ||| || | ||| || | Sbjct 32954 AACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAGA 32895 Query 114193 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 114252 ||| || || || || || ||||| || || || || | | ||| ||||| Sbjct 32894 GGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTCCGG 32835 Query 114253 GGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGC 114311 || || || | || || || | || || |||| ||||||||||| ||||| | || Sbjct 32834 TGATTCGAATGGCAGGCG-CAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATGC 32776 Query 114312 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTAT 114371 |||| ||||| || | | || || || || ||||| || ||| | Sbjct 32775 CAATAGGGCGGTGACGGAAGTTGCTACGACGTGCCTCTTCGACGGGGTAGTGATTGACTT 32716 Query 114372 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT 114431 |||||| | |||| ||||| || || |||| |||| ||| || ||||| | | | | Sbjct 32715 CGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAGT 32656 Query 114432 CAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACA 114491 | || || | || | | ||| || || || || | || |||| || || | Sbjct 32655 CGAACTCGCCACGCTTGTAGTCGACGAACGATGGGAGAGCAAGAGAAGCCAAGTTGCAAA 32596 Query 114492 CAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAA 114551 ||| | |||||| | |||||||| || || || || |||| || || || | Sbjct 32595 CAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGA 32536 Query 114552 TGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATG 114611 |||| || | ||||| || || ||| ||| || |||||||||||||||||| | | Sbjct 32535 TGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAAG 32476 Query 114612 GCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACA 114670 | | || |||||||| || | || ||| || || | ||| | | || | ||| |||| Sbjct 32475 GGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCTTCTG-GGCACGCACT 32417 Query 114671 GTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG-TAGAGGGCTTCAAACTCTTCACC 114729 || || | | || ||||||| ||| || ||| ||||| | || ||||| ||||| Sbjct 32416 GTCTCGCGGCCACGGCCCTCCTTCTCATAGCG-GTGATAGAGCTCCTCGAACTCATCACC 32358 Query 114730 CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTC 114789 | | || | ||| || || |||| | ||||| | || | ||| | || || Sbjct 32357 GTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTTTC 32298 Query 114790 CTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCG 114849 || ||||||||||||||||| || |||||||| ||||| ||||||| || || || Sbjct 32297 CTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCACG 32238 Query 114850 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 114909 | | ||||| | || || || ||| | ||||| ||| | | | ||| |||||||| Sbjct 32237 AACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGCCA 32178 Query 114910 CGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATA 114963 ||| || ||||| | |||| | | ||| |||| ||| |||||| || || Sbjct 32177 CGGCTCGAGGTAGATGGCGAAAG-CACCT--GGACGCTTGTTGCCACCCTGGTCGACGTA 32121 Query 114964 CCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 115023 | || ||| || | || || ||||| ||||||| ||||| ||| || ||||| Sbjct 32120 GCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCGTTTGT 32061 Query 115024 CCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCT 115081 || | || || ||| | |||| | | || | || | ||||||||| || Sbjct 32060 GCCACCAATGTAGGAGCC--GGTGGCACGAATGCGGTGCACGTTGAGACCAATACCGCCA 32003 Query 115082 GCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCA 115141 || ||| ||||| || || | | || | ||||||| || || || ||| Sbjct 32002 GCGGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCATCAATGCTGTCT 31943 Query 115142 CCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAG 115201 |||| | |||| ||||||||| |||||| || ||| ||| ||||| |||||||| Sbjct 31942 TCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCGTTGAAA 31883 Query 115202 AGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC 115260 || || || | ||||| |||| ||| | || ||||| | ||||| ||||| | | | Sbjct 31882 AGTGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATGGC 31824 Query 115261 GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTG-GGGTG 115319 || || || ||||| || |||| | || ||||| | ||||| ||| ||| | Sbjct 31823 CTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTTGTGGGCG 31764 Query 115320 TT 115321 || Sbjct 31763 TT 31762 >seq13 Length=704243 Score = 120 bits (132), Expect = 4e-22 Identities = 302/454 (67%), Gaps = 10/454 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| ||||| ||||||||||||||||| ||||| || ||||| |||||||||||| Sbjct 440282 GTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCCAT 440223 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || || ||||| | | || | | ||| || ||| | | ||| ||| Sbjct 440222 GAAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACCGAGAGCCAA--GAGCAGA 440165 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | ||| |||||||||| | |||| || |||||| |||| || Sbjct 440164 CGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGCAGAGCG 440105 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || || || | ||| ||| ||| ||| || ||||| | |||||| Sbjct 440104 CAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATGATGGCC 440045 Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAA---AGTCTTGAAGAGTTCCACGGCAAAC 126052 || | | ||| | || | | || || || || ||| || ||| || Sbjct 440044 TGGACCGACTCCTTGCTGGGACGAGTGTTCAGGAGAGAAAAGAGGAGG--CA-GGCGAAA 439988 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| | ||||||||||| || ||||| || || |||||| || || |||||| Sbjct 439987 TCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATG 439928 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 ||||| |||||||||| |||||| || | || ||||| ||||||||| ||||| Sbjct 439927 AGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAGATACCCTCG 439868 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || |||||||| | ||||| | ||||||| Sbjct 439867 ACGGCAGCGAACGCGACAAGACGGTTCGCAAAGG 439834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351703402320