Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq93 266 3e-66 >seq93 Length=73557 Score = 266 bits (294), Expect = 3e-66 Identities = 614/919 (67%), Gaps = 6/919 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||| | |||||| || || ||| || ||||||||| || | ||| Sbjct 31692 AACTACCAATTCTTCGGCTTCAAGACGCTCGAGCGCTCATACCTCCTCCGCATCAACGGC 31751 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| |||| || || || || ||||||||||||| || |||| || |||||| | Sbjct 31752 AAGGTTGCCGAACGCCCACAACACATGCTGATGCGCGTGGCTGTCGGCATCCACGGCGAG 31811 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 || || ||| | | | | | | ||||| | | ||| | || || Sbjct 31812 GATATCGAGAAGGCCATCGAGACATACGACTACATGTCGCAGAAGTACTTCACACACGCT 31871 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 |||| || || ||||||||||| ||||| ||| |||||||| || || ||||| || Sbjct 31872 TCCCCTACACTTTTCAACGCGGGTACCCCATCGCCTCAGATGTCGTCCTGCTTCCTCATC 31931 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| ||| ||||| | ||| | || ||| ||||| || Sbjct 31932 GAC-ATGAAGGAAGACAGCATTGATGGAATCTACGATACACTTAAGACATGTGCTTTGAT 31990 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || ||| || || || || ||| || ||| | | ||||||| || ||||| Sbjct 31991 CTCCAAGACCGCTGGCGGTATTGGTCTCAACGTGCACCGCATTCGTGCCACCGGCTCCTA 32050 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| | || || || || || || || || ||| | || |||||||| |||| |||||| Sbjct 32051 CATTGGTGGCACAAACGGTACATCGAATGGTCTCATTCCCATGCTCCGTGTCTACAACAA 32110 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || |||||||| ||||||||||| | | | ||| ||||||| |||| || Sbjct 32111 CACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTCGCCATCTACCT 32170 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||| |||||||| || || | ||| | ||||| || |||||||||||||| || Sbjct 32171 CGAGCCGTGGCACGCTGATGTATTTGGCTTCTTGGACCTTCGTAAGAACCACGGCAAGGA 32230 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| | ||||||||||||||||| ||| | || || || || ||||| || Sbjct 32231 AGAGGTTCGTGCCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCG 32290 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || || ||||| || |||| || | || ||||| || |||||| || | || Sbjct 32291 TGTGCAGGAAAACGGCGAGTGGACGCTGATGTGCCCCAACGAGGCTCCCGGCCTCGCGGA 32350 Query 94374 CGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 ||| | | ||| | | || || || | ||| || || || | ||||| | | Sbjct 32351 CGTCTACGGTGAT-GAG-TTCGAGGAGCTCTATCACCGCTATGAGAAGGAGGGCCGTGGC 32408 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | || || ||| |||||| ||| || ||| | || | ||| |||||| Sbjct 32409 CGCGAGACAGTGCGTGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCTCAGACGGAGACT 32468 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 |||| || | ||| | | |||||| | |||| |||| ||||||| || | ||| Sbjct 32469 GGTAACCCTTTCATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAATCTC 32528 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || ||| ||||| || |||||||| ||||| ||||||| || | || || ||| Sbjct 32529 GGTACCATCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAG 32588 Query 94612 ATTGCTGTGTGTAACCTGG 94630 | ||||| || ||| ||| Sbjct 32589 GTCGCTGTTTGCAACTTGG 32607 Score = 95.1 bits (104), Expect = 1e-14 Identities = 187/273 (68%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || ||||||||||| || ||||| | |||||||||||||||||||||| ||||| || Sbjct 33069 GCTCCCATGCCCACTGCGTCCACCTCCCAGATCCTTGGCAACAACGAGTGCTTCGAGCCG 33128 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | |||||| ||| | ||| | | || || ||||| || || || | || ||||| Sbjct 33129 TACACCTCAAACATCTACTCCCGTCGAGTCCTCGCTGGTGAGTTTCAGGTTGTCAACCCA 33188 Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACT 95282 || || |||||| | || | |||| ||||| || || | ||||||| | Sbjct 33189 TGGCTGCTCAAGGACCTCGTCGAC-ATGGGCTTGTGGTCCGAGAACATGAAGAACCGTAT 33247 Query 95283 GCTACGCGCCAA---CGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGC 95339 | |||| | ||||| || | ||||| | || || ||||| | |||| | Sbjct 33248 CAT---CGCCGAGGGTGGCTCTATCGCAAGGATCCCCAACATCCCCGAGGAGACCAAGAC 33304 Query 95340 GCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || |||||||| || ||||||||| | ||||| Sbjct 33305 CCTATACAAGACTGTCTGGGAGATCTCTCAGCG 33337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721629253840