Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq5 113 4e-20
>seq5
Length=873697
Score = 113 bits (124), Expect = 4e-20
Identities = 166/234 (71%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939
||||| ||| || || | || | |||||| || | ||||||||| || ||||| |||||
Sbjct 38660 TACTG-TCCGCCACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTA 38718
Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999
|| | ||| | | || || |||||||| |||||| |||| | |||||||| ||
Sbjct 38719 GTCAGAGAGCGTCCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTC 38778
Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACT 127059
|| || |||||||||||||| ||| ||| |||| | |||| ||| || |
Sbjct 38779 AGGTGGAATGCCCTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGA 38838
Query 127060 CTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || | ||| | || |||||||| ||||| || || || ||||||||
Sbjct 38839 TTCAACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | ||| || || || ||||||||||| ||
Sbjct 38894 CCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCGAG 38953
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| |||| ||| || |||||| | || | || |||||||| |||||
Sbjct 38954 AGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGG 39013
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||| ||| || ||| ||||| |||| |||| ||| |||| ||| ||
Sbjct 39014 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTG-TCGATGGTATCCGATGACTCCAC 39072
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | || ||||| |||| || || || |||||||||||
Sbjct 39073 CTCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || || || | ||| | |||||||| || || |||||||| |||
Sbjct 39122 CCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGAT 39181
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || || ||| ||||||| ||||||||||| || ||
Sbjct 39182 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGA 39241
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| || ||| ||| | | || | ||| || | ||||||
Sbjct 39242 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGACC 39301
Query 127067 TCGACGGTCACCGTTTTGCCGGTCA 127091
|| | || | |||||||||||||
Sbjct 39302 TCAAGCGTGATAGTTTTGCCGGTCA 39326
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | || | ||| | || ||||| || || || ||||||||| |
Sbjct 39406 CCACCGCGAAGGCGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAC 39465
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || || ||| ||||||| |||||||||||||| ||
Sbjct 39466 AAGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGA 39525
Query 127007 ATGCCCTCCTTGTCCGTGAT-TTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||| ||||||||| ||| || || || |||| |||| ||||| | ||| ||
Sbjct 39526 ATGCCTTCCTTGTCCTGGATCTTGCTCTTTACGTTG-TCGATCGTGTCTGACGACTCCAC 39584
Query 127066 TTCGACGGTCACCGTTTTGCCGGT 127089
|||| ||| | || || |||||
Sbjct 39585 CTCGAGGGTGATAGTCTTACCGGT 39608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499290284960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |