Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq93 123 2e-23
seq5 93.3 4e-14
>seq93
Length=73557
Score = 123 bits (136), Expect = 2e-23
Identities = 409/628 (65%), Gaps = 11/628 (2%)
Strand=Plus/Plus
Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957
||||| |||||||| ||||| ||||| |||||||| ||| | ||| | |||||
Sbjct 31752 AAGGTTGCCGAACGCCCACAACACATGCTGATGCGCGTGGCTGTCGGCATCCACGGCGAG 31811
Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
|| ||||| || || | ||| || ||||| | ||||| || || | ||||| |||||
Sbjct 31812 GATATCGAGAAGGCCATCGAGACATACGACTACATGTCGCAGAAGTACTTCACACACGCT 31871
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077
|| || | ||| ||| || || | ||||||| |||| || || || | ||
Sbjct 31872 TCCCCTACACTTTTCAACGCGGGTACCCCATCGCCTCAGATGTCGTCCTGCTTCCTCATC 31931
Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAAC-TTTGCGCGATTGCGCGTTGAT 123136
| || ||||||||||| || ||||| || || || | | || || |||||
Sbjct 31932 GACATGAAGGAAGACAGCATTGATGGAATCTACGATACACTTAAGACA-TGTGCTTTGAT 31990
Query 123137 TTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG 123196
||||| | ||||| || || | ||||||||| | | | | | ||| |
Sbjct 31991 CTCCAAGACCGCTGGCGGTATTGGTCTCAACGTGCACCGCATTCGTGCCACCGGCTCCTA 32050
Query 123197 CATCAGAAGCACCGACGG--AATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAAT 123254
||| | |||| |||| |||| | || ||| ||||||| || || |||||
Sbjct 32051 CATTGGTGGCACAAACGGTACATCGAAT--GGTCTCATTCCCATGCTCCGTGTCTACAAC 32108
Query 123255 AACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTAT 123311
||| | | || ||||||||||||| || ||| || ||| || | || |||||
Sbjct 32109 AACACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTCGCCATCTAC 32168
Query 123312 CTAGAACCGTGGCACGTTGATGT-GTACGATTTTTTAAATTTAAAACGCAACATGGGGGC 123370
|| || |||||||||| |||||| | | || || | || | | ||| ||
Sbjct 32169 CTCGAGCCGTGGCACGCTGATGTATTTGGCTTCTTGGACCTTCGTAAG-AACCACGGCAA 32227
Query 123371 GGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCG 123430
|||||| |||||||| | || |||||| | ||| | |||||| | || |||
Sbjct 32228 GGAAGAGGTTCGTGCCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTCATGAA 32287
Query 123431 ACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAG 123490
|| || | || |||||| |||| |||| ||||| ||| | | ||||||| |
Sbjct 32288 GCGTGTGCAGGAAAACGGCGAGTGGACGCTGATGTGCCCCAACGAGGCTCCCGGCCTCGC 32347
Query 123491 CGACGTTTACGGCAATCAGTTTGACGAG 123518
||||| ||||| || |||| || |||
Sbjct 32348 GGACGTCTACGGTGATGAGTTCGAGGAG 32375
>seq5
Length=873697
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || | || || |||||||| || || ||||| |||||||| || |||
Sbjct 39119 ATACCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCG 39178
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | || || || ||| | ||||| || ||||| || |||
Sbjct 39179 GATAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGC 39238
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||| ||||| ||||||
Sbjct 39239 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCG 39298
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| || || || | |||||||||||
Sbjct 39299 ACCTCAAGCGTGATAGTTTTGCCGGT 39324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452001764889840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |