Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq93 351 1e-91 seq13 107 2e-18 >seq93 Length=73557 Score = 351 bits (388), Expect = 1e-91 Identities = 1135/1743 (65%), Gaps = 32/1743 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| |||||||| || || ||||||| | | ||||| |||| Sbjct 33490 CGGAGGTAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTG 33431 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | || || | |||| || ||| | | || ||||| ||||||||| Sbjct 33430 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAG 33371 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACA--TCCTTCATCTTGATTTCCCACACAGTTC 115735 ||| || || || ||||| | ||| | | || | | ||| ||||| ||||| Sbjct 33370 GCTCCACGGTCAGCAGCCATCTGAATAATAGTTCGCTGAGA--GATCTCCCAGACAGTCT 33313 Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795 |||| ||| |||| | || || ||||| | ||| || |||||||||||| || Sbjct 33312 TGTATAGGGTCTTGGTCTCCTCGGGGATGTTGGGGATCCTTGCGATAGAGCCACC---CT 33256 Query 115796 TGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA 115852 | | |||| | | |||||| | || ||||| | || || | ||| |||| | Sbjct 33255 CGGCGATGATACGGTTCTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGA 33196 Query 115853 CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGG 115912 || |||||||| ||||||||| |||||| || | |||||||| | Sbjct 33195 GCAGCCATGGGTTGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTG 33136 Query 115913 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 115972 ||||| ||||| |||||||| ||||| || | ||| |||| ||||| || ||||||| Sbjct 33135 AGGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCA 33076 Query 115973 TGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGT 116032 |||| || ||||| ||| |||||||| ||| | ||| ||||| || | Sbjct 33075 TGGGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACG 33016 Query 116033 CCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGG 116092 ||||||| || | | | | | | |||||||||| | |||||||| ||||| | Sbjct 33015 CCCAGTCCCAGAGGTCGGTAGGCGTGACGTTCCACATATCATATTGGAGGATGCCTTGAG 32956 Query 116093 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG 116152 | | ||||| ||||| |||||| ||||||||| ||| || | ||| || | Sbjct 32955 AAACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAG 32896 Query 116153 CCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGT 116212 ||| || || || || || ||||| || || || || | | ||| ||||| Sbjct 32895 AGGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTCCG 32836 Query 116213 CGGAATCAAACGCGAGACGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGG 116271 || || || | || || || | || || |||| ||||||||||| ||||| | | Sbjct 32835 GTGATTCGAATGGCAGGCG-CAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATG 32777 Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 116331 ||||| ||||| || | | || || || || ||||| || ||| Sbjct 32776 CCAATAGGGCGGTGACGGAAGTTGCTACGACGTGCCTCTTCGACGGGGTAGTGATTGACT 32717 Query 116332 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 116391 ||||||| | |||| ||||| || || |||| |||| ||| || ||||| | | | Sbjct 32716 TCGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAG 32657 Query 116392 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 116451 || || || | || | | ||| || || || || | || |||| || || Sbjct 32656 TCGAACTCGCCACGCTTGTAGTCGACGAACGATGGGAGAGCAAGAGAAGCCAAGTTGCAA 32597 Query 116452 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTA 116511 |||| | |||||| | |||||||| || || || || |||| || || || Sbjct 32596 ACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGG 32537 Query 116512 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATAT 116571 ||||| || | ||||| || || ||| ||| || ||||||||||| ||||| | Sbjct 32536 ATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAA 32477 Query 116572 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCAC 116630 || | || |||||||| || | || ||| || || | ||| | | || | ||| |||| Sbjct 32476 GGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCTTCTG-GGCACGCAC 32418 Query 116631 AGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG-TAGAGGGCCTCAAACTCTTCAC 116689 || || | | || ||||||| ||| || ||| ||||| |||| ||||| |||| Sbjct 32417 TGTCTCGCGGCCACGGCCCTCCTTCTCATAGCG-GTGATAGAGCTCCTCGAACTCATCAC 32359 Query 116690 CCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCT 116749 | | || | ||| || || |||| | || || | || | ||| | || | Sbjct 32358 CGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTTT 32299 Query 116750 CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGC 116809 ||| || |||||||||||||| || |||||||| || || ||||||| || || | Sbjct 32298 CCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCAC 32239 Query 116810 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 116869 || | ||||| | || || || ||| | ||||| ||| | | | ||| ||||||| Sbjct 32238 GAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGCC 32179 Query 116870 ACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACAT 116923 |||| || ||||| | |||| | | ||| |||| ||| |||||| || | Sbjct 32178 ACGGCTCGAGGTAGATGGCGAAAG-CACCT--GGACGCTTGTTGCCACCCTGGTCGACGT 32122 Query 116924 ACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG 116983 | | || || ||| | || || ||||| ||||||| ||||| ||| || |||| Sbjct 32121 AGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCGTTTG 32062 Query 116984 TCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCC 117041 | || | || || ||| | | |||| | | ||| | || | ||||||||| || Sbjct 32061 TGCCACCAATGTAGGAGCC--GGTGGCACGAATGCGGTGCACGTTGAGACCAATACCGCC 32004 Query 117042 TGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC 117101 || ||| ||||| || || | | || | ||||||| ||||| || ||| Sbjct 32003 AGCGGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCATCAATGCTGTC 31944 Query 117102 ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 117161 |||| | |||||||||||||| |||||| || ||| ||| ||||| |||||||| Sbjct 31943 TTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCGTTGAA 31884 Query 117162 GAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGA 117220 || || || | ||||| |||| ||| | || ||||| | ||||| ||||| | | Sbjct 31883 AAGTGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATGG 31825 Query 117221 CAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTG-GGGT 117279 | || || || ||||| || |||| | || ||||| | ||||| ||| ||| Sbjct 31824 CCTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTTGTGGGC 31765 Query 117280 GTT 117282 ||| Sbjct 31764 GTT 31762 >seq13 Length=704243 Score = 107 bits (118), Expect = 2e-18 Identities = 299/454 (66%), Gaps = 10/454 (2%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || ||||||||||||||||| ||||| ||| | | | |||||||||||| Sbjct 440282 GTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCCAT 440223 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | || | | ||| || ||| | | ||| ||| Sbjct 440222 GAAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACCGAGAGCCAA--GAGCAGA 440165 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | ||| |||||||||| | |||| || |||||| |||| || Sbjct 440164 CGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGCAGAGCG 440105 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || || || || | ||| ||| ||| || |||||||| | |||||| Sbjct 440104 CAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATGATGGCC 440045 Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGC---GTAAAGTCTTGAAGAGTTCCACAGCAAAC 127525 || | | ||| | || | | || | | || || ||| || || || Sbjct 440044 TGGACCGACTCCTTGCTGGGACGAGTGTTCAGGAGAGAAAAGAGGAGG--CAG-GCGAAA 439988 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 || ||| | ||||||||||| || ||||| || || |||||| || || |||||| Sbjct 439987 TCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATG 439928 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 ||||| |||||||||| |||||| || | || || ||| ||||||||| ||||| Sbjct 439927 AGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAGATACCCTCG 439868 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 || |||||||| | ||||| | ||||||| Sbjct 439867 ACGGCAGCGAACGCGACAAGACGGTTCGCAAAGG 439834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505252114640