Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq93 154 2e-32
>seq93
Length=73557
Score = 154 bits (170), Expect = 2e-32
Identities = 455/688 (66%), Gaps = 14/688 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACATGC 203897
|| |||||| ||||| || |||| | || | |||| || | | || ||||||||||
Sbjct 33533 CTGGTCCACAGTGAATTGGATGG-GAGCAGAGGCGGCCATGGTACGGAGGTAGTACATGC 33475
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| |||||||| || || ||| ||| | ||||||||| | | |||| || | | |
Sbjct 33474 CCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTAG 33415
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || |||||| ||||| |||||||| |||||||||| ||||| || || || ||
Sbjct 33414 GCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATG-AAGGCTCCACGGTCAGCA 33356
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075
||||| | ||||| || ||| || |||||||| || |||||| | | |||| ||||
Sbjct 33355 GCCATCTGAATAATAGTTCGCTGAGAGATCTCCCAGACAGTCTTGTATAGGGTCT-TGGT 33297
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT---GATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132
| | || || || |||| ||| ||||| ||||| || | | |
Sbjct 33296 CTCCTCGGG--GATGTT-GGGGATCCTTGCGATAGAGCCACCCTCGGCGATGATACGGTT 33240
Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192
| || | | ||| ||||| ||||| || || ||| | ||| |||||||
Sbjct 33239 CTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGAGCAGCCATGGGTTGAC 33180
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
| |||||| || || | || || | |||| | | | ||| |||| | || |||||
Sbjct 33179 AACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGAGGTGTACGGCTCGAA 33120
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
|||||||||||| | ||||| | |||| || |||||||||||||| | ||| ||
Sbjct 33119 GCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCATGGGAGCAATGAGGAG 33060
Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372
||||||||| ||||| | | | | | |||||| || | |||||| | |
Sbjct 33059 GGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGCCCAGTCCCAGAGGTC 33000
Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432
| || | ||| |||||| || | || | |||||||||| || || |||||
Sbjct 32999 GGTAGGCGTGACGTTCCACATATCATATTGGAGGATGCCTTGAGAAACAGGCGAGCCCTC 32940
Query 204433 GTACGTCGGATA-AGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491
||| ||| ||| ||| || || | ||| | | ||| || | || | || ||
Sbjct 32939 GTATGTCTTATATGGGCCGA-GTTCCTTTGCAATGTCGCAGGAAGAGGTGAGAGCAGCAT 32881
Query 204492 AGTACATGGTCTCAAAGATCTGAACGTT 204519
||| |||||||| |||||||||| |||
Sbjct 32880 GGTAGATGGTCTCGAAGATCTGAATGTT 32853
Score = 93.3 bits (102), Expect = 7e-14
Identities = 216/323 (67%), Gaps = 2/323 (1%)
Strand=Plus/Minus
Query 205073 TACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGACAC 205132
|| ||| || | || ||| |||||| |||||| || || ||| | ||||| |||
Sbjct 32380 TAGAGCTCCTCGAACTCATCACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCAC 32321
Query 205133 ATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCACAGG 205192
||||| | |||| | || | ||| | || ||| || || ||| |||||||||
Sbjct 32320 ATCAGCGTCCACTCGCCGTTTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGA 32261
Query 205193 CCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGC 205252
|||| || || || ||||| | || | || | || ||||||| | |||||
Sbjct 32260 GCGTAGAAGAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAG 32201
Query 205253 CAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTT 205311
||||| | | || |||||||||||||| | | | ||| | || ||||| | |||
Sbjct 32200 -AAGCCAAATACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTT 32142
Query 205312 GTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAG 205371
||| ||||||||||| || ||||| | |||| | || || ||||| || | ||
Sbjct 32141 GTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAG 32082
Query 205372 ACCGTTGGCGGTCCCGTTCGTGC 205394
||| || | || ||||| ||||
Sbjct 32081 ACCATTCGATGTACCGTTTGTGC 32059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795152675382240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |