Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq93 154 2e-32 >seq93 Length=73557 Score = 154 bits (170), Expect = 2e-32 Identities = 455/688 (66%), Gaps = 14/688 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACATGC 203897 || |||||| ||||| || |||| | || | |||| || | | || |||||||||| Sbjct 33533 CTGGTCCACAGTGAATTGGATGG-GAGCAGAGGCGGCCATGGTACGGAGGTAGTACATGC 33475 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | |||||||| || || ||| ||| | ||||||||| | | |||| || | | | Sbjct 33474 CCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTAG 33415 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 | || |||||| ||||| |||||||| |||||||||| ||||| || || || || Sbjct 33414 GCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATG-AAGGCTCCACGGTCAGCA 33356 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | ||||| || ||| || |||||||| || |||||| | | |||| |||| Sbjct 33355 GCCATCTGAATAATAGTTCGCTGAGAGATCTCCCAGACAGTCTTGTATAGGGTCT-TGGT 33297 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT---GATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132 | | || || || |||| ||| ||||| ||||| || | | | Sbjct 33296 CTCCTCGGG--GATGTT-GGGGATCCTTGCGATAGAGCCACCCTCGGCGATGATACGGTT 33240 Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192 | || | | ||| ||||| ||||| || || ||| | ||| ||||||| Sbjct 33239 CTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGAGCAGCCATGGGTTGAC 33180 Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252 | |||||| || || | || || | |||| | | | ||| |||| | || ||||| Sbjct 33179 AACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGAGGTGTACGGCTCGAA 33120 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 |||||||||||| | ||||| | |||| || |||||||||||||| | ||| || Sbjct 33119 GCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCATGGGAGCAATGAGGAG 33060 Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372 ||||||||| ||||| | | | | | |||||| || | |||||| | | Sbjct 33059 GGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGCCCAGTCCCAGAGGTC 33000 Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432 | || | ||| |||||| || | || | |||||||||| || || ||||| Sbjct 32999 GGTAGGCGTGACGTTCCACATATCATATTGGAGGATGCCTTGAGAAACAGGCGAGCCCTC 32940 Query 204433 GTACGTCGGATA-AGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 ||| ||| ||| ||| || || | ||| | | ||| || | || | || || Sbjct 32939 GTATGTCTTATATGGGCCGA-GTTCCTTTGCAATGTCGCAGGAAGAGGTGAGAGCAGCAT 32881 Query 204492 AGTACATGGTCTCAAAGATCTGAACGTT 204519 ||| |||||||| |||||||||| ||| Sbjct 32880 GGTAGATGGTCTCGAAGATCTGAATGTT 32853 Score = 93.3 bits (102), Expect = 7e-14 Identities = 216/323 (67%), Gaps = 2/323 (1%) Strand=Plus/Minus Query 205073 TACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGACAC 205132 || ||| || | || ||| |||||| |||||| || || ||| | ||||| ||| Sbjct 32380 TAGAGCTCCTCGAACTCATCACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCAC 32321 Query 205133 ATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCACAGG 205192 ||||| | |||| | || | ||| | || ||| || || ||| ||||||||| Sbjct 32320 ATCAGCGTCCACTCGCCGTTTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGA 32261 Query 205193 CCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGC 205252 |||| || || || ||||| | || | || | || ||||||| | ||||| Sbjct 32260 GCGTAGAAGAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAG 32201 Query 205253 CAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTT 205311 ||||| | | || |||||||||||||| | | | ||| | || ||||| | ||| Sbjct 32200 -AAGCCAAATACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTT 32142 Query 205312 GTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAG 205371 ||| ||||||||||| || ||||| | |||| | || || ||||| || | || Sbjct 32141 GTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAG 32082 Query 205372 ACCGTTGGCGGTCCCGTTCGTGC 205394 ||| || | || ||||| |||| Sbjct 32081 ACCATTCGATGTACCGTTTGTGC 32059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152675382240