Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq13 176 5e-39
seq5 129 6e-25
seq9 125 7e-24
seq44 109 5e-19
>seq13
Length=704243
Score = 176 bits (194), Expect = 5e-39
Identities = 205/276 (74%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||||||||| || || || | || ||||| | ||||||||| ||| || ||
Sbjct 439675 GTAGGTGTCGATCAGCAGAGAGTATGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAA 439616
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
|||||| ||||||| ||||||| | || ||||| | ||| |||||||| || ||
Sbjct 439615 GCCGTAGAAGCACCTCGCCTCGGGTATTTGTACTTCGCCGGAGAAGCGCTCGACTAGGTT 439556
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||||||||| || ||||||||||||||| || ||||| ||| || |||
Sbjct 439555 CTCGTTGACGATGCCATCTGAGGCGGCGAAAAAGGCTAGGACGTGGGAGATAAAGAAGCG 439496
Query 133347 CTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||||| ||||||||| ||| | ||||||| | |||||||| || || | ||| ||
Sbjct 439495 CTCGTCGTCGTTCAATCGCTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCTTC 439436
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| | ||||| || || || ||||| || ||||||||
Sbjct 439435 GGCTGTCCAGAAGGATGCTTCGGCCTTCTTGTACAT 439400
Score = 161 bits (178), Expect = 1e-34
Identities = 352/516 (68%), Gaps = 12/516 (2%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| || || || ||||| || ||||| || || || || || || |
Sbjct 440300 CATGACACCAGCCTTCTGGTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGC 440241
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTG---CC 132707
|||||| || | ||| || || |||||||||| | ||||| ||||||| ||
Sbjct 440240 CAAGGAGATATTCTCCATGAAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACC 440181
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766
|| || | | |||||| | |||||| |||||||| |||||||| ||||| | | ||
Sbjct 440180 GAG-AG--CCAAGAGCAGACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGC 440124
Query 132767 AATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825
| | | || |||||| |||| ||||| || || || || || |||||||| | |
Sbjct 440123 GTTCATG-CCGAGCAGAGCGCAA-GGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTG 440066
Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTG 132885
|| || || |||| ||| || || | || ||| || || || |
Sbjct 440065 ACAGCTTCAGTGATGATGGCCTGGACCGACTCCTTGCTGGGACGAGTGTTCAGGAGAGAA 440006
Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945
|| | | ||| || || ||| |||| ||||||||| | |||||||| |||||| |
Sbjct 440005 AAGAGGAGGCAGGCGAAATCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAG 439946
Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005
|| || | |||||||||||| ||||| || || ||||| || |||| |||||| ||
Sbjct 439945 AAGGTGAGGCCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCA 439886
Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTC 133064
||||||| ||||||||||| ||||| || || || || | | || |||| |||
Sbjct 439885 CTGAAGAAGATACCCTCGACGGCAGCGAACGCGACAAGACGGTTCGCAAAGGTGGAGTTC 439826
Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
|| | | |||||| ||||| ||||| ||||||||
Sbjct 439825 TTATC-AGAGATCCATCGCAGAGCCCAGTCGGCCTT 439791
>seq5
Length=873697
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || || | | |
Sbjct 38892 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACCTTGGAGGTTGAATCGAGC 38833
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | ||| || |||| ||||| ||||| ||||| | |||||
Sbjct 38832 GATACCATCGATAACG-TCAAATCGAAGATCCAAGACAAGGAGGGCATTCCACCTGACCA 38774
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || ||||||||||| |||| | || ||| ||||||||
Sbjct 38773 GCAGCGTCTTATCTTCGCTGGTAAACAGCTGGAAGACGGTAGGACGCTCTCTGACTACAA 38714
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || ||||| | |||||||| |||||||| ||| | | |||||
Sbjct 38713 CATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGTCTTCGTGGCGG 38666
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||| || || || |||||| |||| || ||| | | |||| || | | | |||||
Sbjct 39610 TCACCGGTAAGACTATCACCCTCGAGGTGGAGTCGTCAGACA-CGATCGACAACGTAAAG 39552
Query 38326 AAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
| || |||| ||||| || || |||||| |||| || ||||| | || | ||| |||
Sbjct 39551 AGCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGCAGCGCTTGATCTTCGCCGGC 39492
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444
|| ||||| || || | || ||| | ||| ||||||||||| ||||| |||| ||
Sbjct 39491 AAGCAGCTCGAGGATGGCCGTACCTTGTCCGATTACAACATCCAGAAGGAGTCGACTCTT 39432
Query 38445 CATTTGGTGCTGCG 38458
||| | || || ||
Sbjct 39431 CATCTTGTCCTCCG 39418
>seq9
Length=754770
Score = 125 bits (138), Expect = 7e-24
Identities = 107/132 (81%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| ||||| |||||| | ||||| ||||| || |||| ||| |||||
Sbjct 276289 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCCGGCAAG 276230
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
||||| || |||| ||||||||| ||||||||||||||| |||||| ||||||| ||
Sbjct 276229 CAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAATCGACGCTTCAC 276170
Query 38448 TTGGTGCTGCGT 38459
||||| || |||
Sbjct 276169 TTGGTCCTCCGT 276158
>seq44
Length=299893
Score = 109 bits (120), Expect = 5e-19
Identities = 111/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| | ||||| ||||| |||||| | ||||| ||||| || || | ||| ||||
Sbjct 197928 AATAAATTGTAGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCCGGCA 197987
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| ||||| || || | ||||||||| ||||||||||||||| ||||| |||| || |
Sbjct 197988 AGCAGCTCGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTC 198047
Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470
| ||||| || ||| || | || ||
Sbjct 198048 ACTTGGTCCTCCGTCTGCGTGGTGG 198072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171211951360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |