Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq13 176 5e-39 seq5 129 6e-25 seq9 125 7e-24 seq44 109 5e-19 >seq13 Length=704243 Score = 176 bits (194), Expect = 5e-39 Identities = 205/276 (74%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||||||| || || || | || ||||| | ||||||||| ||| || || Sbjct 439675 GTAGGTGTCGATCAGCAGAGAGTATGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAA 439616 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||||| ||||||| | || ||||| | ||| |||||||| || || Sbjct 439615 GCCGTAGAAGCACCTCGCCTCGGGTATTTGTACTTCGCCGGAGAAGCGCTCGACTAGGTT 439556 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||||||||| || ||||||||||||||| || ||||| ||| || ||| Sbjct 439555 CTCGTTGACGATGCCATCTGAGGCGGCGAAAAAGGCTAGGACGTGGGAGATAAAGAAGCG 439496 Query 133347 CTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| ||||||||| ||| | ||||||| | |||||||| || || | ||| || Sbjct 439495 CTCGTCGTCGTTCAATCGCTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCTTC 439436 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||| || || || ||||| || |||||||| Sbjct 439435 GGCTGTCCAGAAGGATGCTTCGGCCTTCTTGTACAT 439400 Score = 161 bits (178), Expect = 1e-34 Identities = 352/516 (68%), Gaps = 12/516 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || ||||| || ||||| || || || || || || | Sbjct 440300 CATGACACCAGCCTTCTGGTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGC 440241 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTG---CC 132707 |||||| || | ||| || || |||||||||| | ||||| ||||||| || Sbjct 440240 CAAGGAGATATTCTCCATGAAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACC 440181 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766 || || | | |||||| | |||||| |||||||| |||||||| ||||| | | || Sbjct 440180 GAG-AG--CCAAGAGCAGACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGC 440124 Query 132767 AATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825 | | | || |||||| |||| ||||| || || || || || |||||||| | | Sbjct 440123 GTTCATG-CCGAGCAGAGCGCAA-GGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTG 440066 Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTG 132885 || || || |||| ||| || || | || ||| || || || | Sbjct 440065 ACAGCTTCAGTGATGATGGCCTGGACCGACTCCTTGCTGGGACGAGTGTTCAGGAGAGAA 440006 Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945 || | | ||| || || ||| |||| ||||||||| | |||||||| |||||| | Sbjct 440005 AAGAGGAGGCAGGCGAAATCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAG 439946 Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005 || || | |||||||||||| ||||| || || ||||| || |||| |||||| || Sbjct 439945 AAGGTGAGGCCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCA 439886 Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTC 133064 ||||||| ||||||||||| ||||| || || || || | | || |||| ||| Sbjct 439885 CTGAAGAAGATACCCTCGACGGCAGCGAACGCGACAAGACGGTTCGCAAAGGTGGAGTTC 439826 Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 || | | |||||| ||||| ||||| |||||||| Sbjct 439825 TTATC-AGAGATCCATCGCAGAGCCCAGTCGGCCTT 439791 >seq5 Length=873697 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || || | | | Sbjct 38892 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACCTTGGAGGTTGAATCGAGC 38833 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | ||| || |||| ||||| ||||| ||||| | ||||| Sbjct 38832 GATACCATCGATAACG-TCAAATCGAAGATCCAAGACAAGGAGGGCATTCCACCTGACCA 38774 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || ||||||||||| |||| | || ||| |||||||| Sbjct 38773 GCAGCGTCTTATCTTCGCTGGTAAACAGCTGGAAGACGGTAGGACGCTCTCTGACTACAA 38714 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| | |||||||| |||||||| ||| | | ||||| Sbjct 38713 CATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGTCTTCGTGGCGG 38666 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| || || || |||||| |||| || ||| | | |||| || | | | ||||| Sbjct 39610 TCACCGGTAAGACTATCACCCTCGAGGTGGAGTCGTCAGACA-CGATCGACAACGTAAAG 39552 Query 38326 AAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 | || |||| ||||| || || |||||| |||| || ||||| | || | ||| ||| Sbjct 39551 AGCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGCAGCGCTTGATCTTCGCCGGC 39492 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || ||||| || || | || ||| | ||| ||||||||||| ||||| |||| || Sbjct 39491 AAGCAGCTCGAGGATGGCCGTACCTTGTCCGATTACAACATCCAGAAGGAGTCGACTCTT 39432 Query 38445 CATTTGGTGCTGCG 38458 ||| | || || || Sbjct 39431 CATCTTGTCCTCCG 39418 >seq9 Length=754770 Score = 125 bits (138), Expect = 7e-24 Identities = 107/132 (81%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| |||||| | ||||| ||||| || |||| ||| ||||| Sbjct 276289 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCCGGCAAG 276230 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| ||||||||| ||||||||||||||| |||||| ||||||| || Sbjct 276229 CAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAATCGACGCTTCAC 276170 Query 38448 TTGGTGCTGCGT 38459 ||||| || ||| Sbjct 276169 TTGGTCCTCCGT 276158 >seq44 Length=299893 Score = 109 bits (120), Expect = 5e-19 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| | ||||| ||||| |||||| | ||||| ||||| || || | ||| |||| Sbjct 197928 AATAAATTGTAGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTCGCCGGCA 197987 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || || | ||||||||| ||||||||||||||| ||||| |||| || | Sbjct 197988 AGCAGCTCGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTC 198047 Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470 | ||||| || ||| || | || || Sbjct 198048 ACTTGGTCCTCCGTCTGCGTGGTGG 198072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171211951360