Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq5 336 3e-87 seq14 201 1e-46 seq21 122 1e-22 seq27 105 8e-18 >seq5 Length=873697 Score = 336 bits (372), Expect = 3e-87 Identities = 585/848 (69%), Gaps = 6/848 (1%) Strand=Plus/Minus Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 || || || ||||| | || || || | || || | || ||||| |||||||| || Sbjct 307449 GAGTCGATCTCAATTGAAGTCTGCGCGGAGGACGACAGTGTACGCTTGGCGCGCTCGCAA 307390 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || ||||| | |||||| || ||||| | ||| || | ||| ||||| || || || Sbjct 307389 GCGGTTCGGAGACGACGGAGAGCACGAGCGTTGGAGGTCAAATCCTTCTTGTGCTTGCGC 307330 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 || ||||| | | |||||| | ||| | ||||| || |||||||||||||| Sbjct 307329 TTGAACTCGTTTGTGAAGTGGTTGACGAGGCGGTTGTCGAAGTCCTCACCACCCAAGTGA 307270 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || |||| ||||| || |||||||| | |||||| | || | || ||| Sbjct 307269 GTGTCTCCGGCAGTCGACTTGACCTCGAAGATACCCTCCTCAATGGTCAAGAGGGAGACA 307210 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600 || || ||||||||||||| || || ||||| ||||| || || | ||||| Sbjct 307209 TCGAAGGTACCACCACCCAAATCGAAGATGAGGACGTTGCGCTCACCGGTGGTCTTCTTG 307150 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 ||||||||||| ||||| || || || || || || || || ||||| || ||| ||| Sbjct 307149 TCGAGACCGTAGGCGATGGCAGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTGAGG 307090 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 |||||||| | ||||| || || || || || || || ||||| |||||||| ||| Sbjct 307089 CCAGCAATGAGACCAGCATCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAGGCAGGG 307030 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || || || |||| |||| | |||||| || || |||||| | || |||| Sbjct 307029 ACAGTGACAACGGCGTTGTTGACGGTGCCACCGAGGTATGACTCCGCGGTTTCCCTCATC 306970 Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAA 7840 ||||| | ||||| ||||| ||||| |||| | || ||| || || || || Sbjct 306969 TTGGTCAAGACCATGGATGAGATCTCCTCAGGTGTGAAAGTCTTCTCCTCGCCCTTGAAC 306910 Query 7841 TCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTC 7900 || |||| || | || || |||| | | ||| ||||| | | | | ||| Sbjct 306909 TCGACTTGGATGACAGGCTT-GCCGC--CCTTGTCGATGACCTTGAAGGGGAAGTGCTTC 306853 Query 7901 ATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAA 7960 || ||| | ||||||| | || | ||| || | ||||| || |||||||| || || Sbjct 306852 ATGTCGGCCTGGACCTCAGGATCGGCAAATTTGCGACCGATGAGGCGCTTTGCGTCGAAG 306793 Query 7961 ACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCA 8020 || ||||| |||||||||||| |||||||||||| | ||| ||||| || || || Sbjct 306792 ACGGTGTTAACGGGGTTCATGGCGACTTGGTTCTTCGCTGAGTCGCCGATGAGGCGCTC- 306734 Query 8021 TTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATA 8080 | || || || || ||| |||| || || || || || || |||||||| || || Sbjct 306733 --GGTGTCTGTGAAAGCAACGAACGAGGGCGTGGTGCGGTTGCCCTGGTCGTTGGCGATG 306676 Query 8081 ATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATA 8140 ||||| | ||| || | | | | || || || || || |||||||| | || ||| Sbjct 306675 ATTTCGATGCGATCATCCCGGAAAATACCTACACAAGAGTAGGTTGTTCCCAGGTCGATA 306616 Query 8141 CCGATTGC 8148 |||||||| Sbjct 306615 CCGATTGC 306608 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/258 (67%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | ||||| ||||| || || | || ||||| || || |||||||||||||| Sbjct 307845 TCACCGGACAAGATAGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 307786 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || | || || | ||| | || | || ||| Sbjct 307785 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGG 307726 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||||||||| ||||| || | || || || |||||||| | Sbjct 307725 ATACGGGTTGAGCCACCGACCAAGACGATCTCGTGGACGGAAGACTTGTCGATCTTAGCA 307666 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| ||||| | ||| || || ||| Sbjct 307665 TCGCGGAGGACGCGCTCGACGGGCTCCATGGTGGAGCGGAAGAGATCCTGGCAGAGCTCC 307606 Query 7250 TCAAAACGTGCACGGGTA 7267 ||||| | ||||||||| Sbjct 307605 TCAAATCTAGCACGGGTA 307588 >seq14 Length=695267 Score = 201 bits (222), Expect = 1e-46 Identities = 359/519 (69%), Gaps = 9/519 (2%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| ||||| ||||| |||||||| ||| || | |||||| |||| ||| | | ||| Sbjct 595057 CAGGTCCTCGAAACGAGCACGGGTGATGTTTGCGTTGAAATCCTCGCCATCGAACAGCGA 595116 Query 7303 ATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 ||| || |||| || || || | ||| | ||| | |||||||| || || || || Sbjct 595117 ATCGATCTCAACAGTGGTCTGGGTAGCGTTGGAGAGA--GTTCGCTTGGCACGTTCGCAA 595174 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || ||||| | ||| || || || || | | || || ||||| |||||| ||| | Sbjct 595175 GCAGTTCGGAGACGGCGCAGAGCGCGGGCATCTCCTGAGATATCCTTCTTAGTTTTTCTA 595234 Query 7421 TTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 | || || | |||||| |||| | || | | ||||||||||| ||| || | || Sbjct 595235 GTGAATTCCTTCTTGAAGTGGTCGA-GAAGGTTAGTATCGAAATCTTGACCGCCAAGATG 595293 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 ||||| || ||||| || ||||| || | ||| |||| |||| | || || || Sbjct 595294 AGTATCACCAGCGGTGGCCTTGACGGTGAAAACACCGCCTTGGATGTGCAGCAGAGACAC 595353 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTT 7596 ||| || ||||||||||| || || | ||||| |||||| | || | ||| || Sbjct 595354 ATCGAAAGTACCACCACCAAGATCGTAGATGAGGACGTTCCTCTCCTTGTCCGACTTTCC 595413 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 | |||||||||| |||||||| || || || || || || || ||||| ||| ||| Sbjct 595414 GGAACCGAGACCGTAGGCGATAGCGGCGGCGGTGGGCTCGTTGATGATACGGAGAACGTT 595473 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 ||||||||| || | | || || || || ||||| || || ||||| |||||||| Sbjct 595474 CAGGCCAGCGATGGCACCGGCGTCCTTGGTGGCTTGGCGCTGGTTGTCGTTGAAGTAGGC 595533 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || | ||| || | | || ||||| ||||| Sbjct 595534 GGGCACGGTGATGACAGCCTTCTCAACCTTCTTGCCGAG 595572 >seq21 Length=517113 Score = 122 bits (134), Expect = 1e-22 Identities = 242/356 (68%), Gaps = 2/356 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || ||||| || || || | | ||| || || | || Sbjct 392894 TCGAAATCCTCACCACCAAGATGAGTATCACCGGCAGTAGACTGGACCTCGAAAACGCCC 392835 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| ||| | | | |||||||| || ||||||||||| || || | | || || Sbjct 392834 TCTTCGATGGTGAGAATTGAAACATCGAATGTACCACCACCGAGATCGTAGACAAGGACC 392775 Query 7577 T-TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | ||| || | | | | |||| ||||| ||||| || | ||| || || || ||||| Sbjct 392774 TGGCGT-TCCTTCTGATCGGTCTTGTCGAGGCCGTAAGCCAGAGCGGCAGCGGTGGGTTC 392716 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | | ||| ||| ||| || || || |||||| | || || || || || || Sbjct 392715 GTTGACGACACGGAGAACGTTTAGACCGGCGATAGTTCCGGCGTCCTTGGTGGCAGCGCG 392656 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| ||||| || || || |||| | |||| || ||||| Sbjct 392655 CTGAGCGTCGTTGAAGTAGGCGGGGACGGTAACAACAGCGTTCTTGACCGGCTCGCCGAG 392596 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 ||| || |||| || ||||| || |||||||| | || || || |||| Sbjct 392595 ATAGCTCTCAGCGACCTCCTTCATCTTACCGAGAACCATGGCCGAGATTTCCTCAG 392540 >seq27 Length=457153 Score = 105 bits (116), Expect = 8e-18 Identities = 227/338 (67%), Gaps = 10/338 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||| | || || || || ||| | ||||| ||||||| ||| Sbjct 116993 ATCGAAGTCCTCACCACCGAGATGAGTGTCACCGTTGGTGGACTTGACCTCAAAGACACC 117052 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | | || | | | || | ||| || ||||||||||| || || | | | || Sbjct 117053 AGCCTGGATCTCGAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACGGCGAC 117112 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | ||| ||| || ||| || |||||||| || | || || || || || || Sbjct 117113 ------AACGTTGTCCGTGGCCTTGTCAAGACCGTAGGCAAGGGCGGCAGCGGTAGGCTC 117166 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGT 7693 || | | ||| ||| |||||| || || || ||| | ||||| || || || || Sbjct 117167 GTTGACGACACGGAGAACGTTCAGTCCGGCGAT--TTGACCGGCATCCTTGGTGGCCTGA 117224 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || || ||||| |||||||| ||||| || ||||| |||| | |||| |||| || Sbjct 117225 CGCTGGGAGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTTCTTGACGGTCTTGCCC 117284 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 | || || || ||| | || ||||| ||| ||| || Sbjct 117285 ATGTAGGACTCGGCGGTCTCCTTCATCTTGCCAAGGAC 117322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130783453360