Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq93 250 3e-61 seq13 131 2e-25 seq5 87.8 2e-12 >seq93 Length=73557 Score = 250 bits (276), Expect = 3e-61 Identities = 963/1488 (65%), Gaps = 31/1488 (2%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 |||||| ||||| | ||||| || || |||| ||||| || || ||||| || | Sbjct 31766 CCCACAACACATGCTGATGCGCGTGGCTGTCGGCATCCACGGCGAGGATATCGAGAAGGC 31825 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | |||||||||||| | ||||| | | ||| |||| ||||| | || || || | Sbjct 31826 CATCGAGACATACGACTACATGTCGCAGAAGTAC-TTCACACACGCTTCCCCTACACTTT 31884 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||| ||||| ||| || || ||||| || ||||| || | | ||||| | Sbjct 31885 TCAACGCGGGTACCCCATCGCCTCAGATGTCGTCCTGCTTCCTCATCGACATGAAGGAAG 31944 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || |||| || |||| || || | |||||| ||||| ||| |||| Sbjct 31945 ACAGCATTGATGGAATCTACGATACACTTAAGACATGTGCTTTGATCTCCAAGACCGCTG 32004 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907 | ||||| || | || | || | | |||| | | ||| || || | || || Sbjct 32005 GCGGTATTGGTCTCAACGTGCACCGCATTCGTGCCACC--GGCTCCTACATTGGTGGCAC 32062 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||| ||| ||| ||||| | ||||| ||||| || || | ||| ||| || ||||| Sbjct 32063 AAACGGTACATCGAATGGTCTCATTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTA 32122 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||| | ||| ||||| || | | || |||| |||| || ||||| || Sbjct 32123 CGTCGACCAGGGTGGCAACAAGCGTC-CAGGTG--CTTTCGCCATCTACCTCGAGCCGTG 32179 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| ||| | | | ||| | || | ||| ||||| || | || |||| || Sbjct 32180 GCACGCTGATGTATTTGGCTTCTTGGACCTTCGTAAGAACCACGGCAAGGAAGAGGTTCG 32239 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 |||||| ||||||| |||||| ||||| || ||||||||||||||| | || |||| Sbjct 32240 TGCCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTGCAGGA 32299 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | ||| | ||| | || | || || || |||| ||||| ||| | || | | || Sbjct 32300 AAACGGCGAGTGGACGCTGATGTGCCCCAACGAGGCTCCCGGCCTCGCGGACGTCTACGG 32359 Query 112202 TGAGGAGTTTGAAGCCCTCTA-CACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACG 112259 ||| ||||| || | ||||| ||| || ||| | || | || ||| | | ||| Sbjct 32360 TGATGAGTTCGAGGAGCTCTATCAC-CGCTATGAGAAGGAGGGCCGTGGCCGC-GAGACA 32417 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 |||| || | || | | ||| | || || ||| || |||| || |||||||||| || Sbjct 32418 GTGCGTGC-CCAGAAGCTTTGGTATGCCATCCTCGAGGCTCAGACGGAGACTGGTAACCC 32476 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 | ||||||||||| || ||||| |||| ||||| || || |||||| | ||| || Sbjct 32477 TTTCATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAATCTCGGTACCAT 32536 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438 | || |||||||| || || || ||| | || | || | |||||| ||||| Sbjct 32537 CCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAGGTCGCTGT 32596 Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTG 112497 || ||| | || || | |||||||| || || || | | | | | | || | Sbjct 32597 TTGCAACTTGGCTTCTCTTGCTCTCCCATCGTTCGTCGA-CTACAAGCGTGGCGAGTTCG 32655 Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557 | | | || || |||||||| || | || || || || || | |||| | Sbjct 32656 ACTTCCAGAAGCTGCACGAAGTCACTCAGGTCGTGACGCGTAATCTGAATAAGATTATCG 32715 Query 112558 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 | ||| |||||||| || || ||| || | | ||||| || |||| Sbjct 32716 AAGTCAATCACTACCCCGTCGAAGAGGCACGTCGTAGCAACTTCCGTCACCGCCCTATTG 32775 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCC 112676 | | ||||| ||||||||||| |||| ||| || || || |||| |||| || || Sbjct 32776 GCATGGGTGTGCAAGGTCTCGCCGATGCCTTCCTTGCTCTG-CGCCTGCCATTCGAATCA 32834 Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAG 112736 || || ||| || |||| | || || ||||| || || || || ||||| Sbjct 32835 CCGGAGGCTAAGAAACTCAACATTCAGATCTTCGAGACCATCTACCATGCTGCTCTCACC 32894 Query 112737 GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796 | | || | ||| ||| || |||||| | || | ||||| || || | | Sbjct 32895 TCTTCCTGCGACATTGCAAAGGAACTCGGCCCATATAAGACATACGAGGGCTCGCCTGTT 32954 Query 112797 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTG 112855 || ||||| | || |||| |||||||| |||| || | || | | | || ||||| Sbjct 32955 TCTCAAGGCATCCTCCAATATGATATGT-GGAACGTCACGCCTACCGACCTCTGGGACTG 33013 Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915 || | || ||||| || || | ||| | || ||| || | || || || Sbjct 33014 GGCGTCGCTGAAGGAGAAGATTGCTCAGCATGGTGTCCGCAACTCCCTCCTCATTGCTCC 33073 Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 ||||| || || |||||| | || ||| | || || || || ||||| || || ||||| Sbjct 33074 CATGCCCACTGCGTCCACCTCCCAGATCCTTGGCAACAACGAGTGCTTCGAGCCGTACAC 33133 Query 112976 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT-- 113033 | |||||||| | || |||||| || |||||| | |||||||| ||| Sbjct 33134 CTCAAACATCTACTCCCGTCGAGTCCTCGCTGGTGAGTTTCAGGTTGTCAAC--CCATGG 33191 Query 113034 CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 || | | |||||| || || || | |||||| || | |||||| Sbjct 33192 CTGCTCAAGGACCTCGTCGACATGGGCTTGTGGTCCGAGAACATGAAG 33239 >seq13 Length=704243 Score = 131 bits (144), Expect = 2e-25 Identities = 155/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAG 102164 ||||||||||| || | ||||| || || |||||| || ||| | ||||| || Sbjct 439770 ACAGTTCCATGCATCCGCAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGATAAGAAC 439829 Query 102165 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 102224 || ||||||| | || || |||| || || || ||||||||||||||| | Sbjct 439830 TCCA---CCTTTGCGAACCGTCTTGTCGCGTTCGCTGCCGTCGAGGGTATCTTCTTCAGT 439886 Query 102225 GGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284 ||||||||| | | || | ||||| |||||||| ||||||||||| || ||| |||| Sbjct 439887 GGTTCCTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTC 439946 Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||||||||| || || ||||||||||| Sbjct 439947 TCCAACGAGCTCATTTCGCGTGACGAGGG 439975 >seq5 Length=873697 Score = 87.8 bits (96), Expect = 2e-12 Identities = 268/406 (66%), Gaps = 19/406 (5%) Strand=Plus/Plus Query 15849 CGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGGCGAAGG 15908 || || | |||| |||||| |||| || | | ||||| ||||| || || || ||| Sbjct 86431 CGCCCTCCAACATCTGGGAGCTCTACCTGAACGTGGCGATCGAAGCGTCCGGGTCGGAGG 86490 Query 15909 AGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCG 15968 || || | ||||| | ||| | | || || ||||| || | || | ||| || Sbjct 86491 AGAGCCTGGTCAAGAAGCTCAGGGTGGTTGGTAGCGGCAATAAAAATGACACCGGTGCTC 86550 Query 15969 TTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTC 16028 | |||||||||||| | || | | ||| || || | ||||| || | | || Sbjct 86551 TGATCAAAACCATCGAGATCGTTGAGAAGTTGATTTAGGGTTTGA---CGGTGGTAGTT- 86606 Query 16029 GCTGGCATACCACCAGCACTGCGTTGCTTTCC---CACGGCATCAATCTCATCAATGAAG 16085 ||||| | | | || | ||||||| ||||||||| | ||| || ||||| Sbjct 86607 ---GGCATCGCGCGA---CTT--TCGCTTTCCGCCCACGGCATCGAGCTCGTCGATGAAT 86658 Query 16086 ACGAT-GCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCC 16144 ||||| ||| ||| || |||| || || ||||| || || |||||||| || || Sbjct 86659 ACGATAGCA-GGTGCTTTGGCGCGCGCAGCTGTGAAGAGCTCGCGGACACGCTTAGCTCC 86717 Query 16145 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT-TGGATGAAGGGGACATTAG 16203 ||||| ||| | | ||| | || | | | | |||| | || |||||||||| | Sbjct 86718 GACACCCACATAGACCTCGTCGAATTCAGAACCAG-ACATGTAGAAGAAGGGGACACCGG 86776 Query 16204 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 ||| || |||| || ||||| || || |||||||| ||||| || Sbjct 86777 CTTCGCCTGCAACAGCACGGGCAAGCAGCGTCTTACCGGTACCAGG 86822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740429142880