Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq93 269 3e-67 seq2 123 3e-23 >seq93 Length=73557 Score = 269 bits (298), Expect = 3e-67 Identities = 1090/1692 (64%), Gaps = 55/1692 (3%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || || || ||||| ||||| || || || ||||||| || | ||||| || | | Sbjct 33490 CGGAGGTAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTG 33431 Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527 | ||| | || || || ||| | ||| | |||||||| || |||||||| Sbjct 33430 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAG 33371 Query 109528 CGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAGT 109583 ||||| ||||| ||||| | || ||| || ||| | | ||||||||||| Sbjct 33370 GCTCCACGGTCAGCAGCCATCTGAATAATAG----TTCGCTGAGAGATCTCCCAGACAGT 33315 Query 109584 CTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGC 109643 |||||| | ||||| | || ||||| |||| ||| || ||||||||||| Sbjct 33314 CTTGTATAGGGTCTTGGTCTCCTCGGGGATGTTGGGGATCCTTGCGATAGAGCCACC--- 33258 Query 109644 CTTCACCATGAGA---TCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTC 109700 || | |||| | | |||||| | | ||||| | || | | ||| || | Sbjct 33257 CTCGGCGATGATACGGTTCTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTT 33198 Query 109701 AACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATG 109758 | || ||| |||||| || ||| |||||||| || || ||| ||||||| Sbjct 33197 GAGCAGCCATGG--GTTGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATG 33140 Query 109759 TTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTG 109818 || | ||||| || ||||| ||||| |||||||| ||||| || | ||||| || ||| Sbjct 33139 TTTGAGGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTG 33080 Query 109819 GGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATT 109878 ||||||||||| ||||| || ||| |||| ||| | | | | ||| || Sbjct 33079 GGCATGGGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGC 33020 Query 109879 GCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGT 109938 | |||| || | | | || | | || ||| ||||||| ||| || Sbjct 33019 GACGCCCAGTCCCAGAGGTCGGTAG-----GCGTGACGTTCC-ACATATCATATTGGAGG 32966 Query 109939 ACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAAC 109998 | || | || | |||| || |||| | | ||| || | || ||| || | Sbjct 32965 ATGCCTTGAGAAACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTTGCAATG 32906 Query 109999 TCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGG 110058 ||| | |||| || || ||||| || || ||||| || || ||| || | Sbjct 32905 TCGCAGGAAGAGGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTC 32846 Query 110059 CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAGACCCTG 110117 || ||| | ||||| || || | || || || || |||| || ||||| || Sbjct 32845 TTAGCCTCCGGTGATTCGAATGGCAGGCG-CAGAGCAAGGAAGGCATCGGCGAGACCTTG 32787 Query 110118 AACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTA 110177 ||||| | ||||| ||||| || | ||| || || || ||| |||||||| Sbjct 32786 CACACCCATGCCAATAGGGCGGTGACGGAAGTTGCTACGACGTGCCTCTTCGACGGGGTA 32727 Query 110178 AAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAG 110237 ||| ||||| | | ||| ||||| |||||| || |||| ||| || || Sbjct 32726 GTGATTGACTTCGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAG 32667 Query 110238 TTTGTCGTAATCGAACGTTTTCGTCTC-CTTATTG---ACATATTTGGGGAGAGCAATAG 110293 || | | | |||||| ||| | | ||| | | || | |||||||||| || Sbjct 32666 CTTCTGGAAGTCGAAC----TCGCCACGCTTGTAGTCGACGAACGATGGGAGAGCAAGAG 32611 Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353 | || | ||||| |||| ||| || ||||||| || | || || || |||| Sbjct 32610 AAGCCAAGTTGCAAACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACA 32551 Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413 |||||| || ||| ||| | |||||||| || ||| |||||| ||||||| Sbjct 32550 GGTTGGAGCTGCGGATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCT 32491 Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CA 110472 | || |||||| | ||| ||||||| |||||||| | || ||| ||||| | ||| | | Sbjct 32490 TGTAAAGCATGAAAGGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCT 32431 Query 110473 TCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTG-TACAAGTC 110531 || | ||| | || || || | | || |||| ||| || |||| || | || Sbjct 32430 TCTG-GGCACGCACTGTCTCGCGGCCACGGCCCTCCTTCTCATAGC-GGTGATAGAGCTC 32373 Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 ||| || || | ||||| || || | || || |||| || ||| || | || | Sbjct 32372 CTCGAACTCATCACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGT 32313 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||| | || |||| || | ||||||||| || || || ||||||| || |||| Sbjct 32312 CCACTCGCCGTTTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAA 32253 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 ||||| ||| |||| ||||||| | || ||||| || || ||||| ||| | | Sbjct 32252 GAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAA 32193 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-------TGGATCCCTTACGACGAC 110764 | ||| | |||||| || ||||| |||| |||| |||| | ||| | || Sbjct 32192 TACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGA-CGCTTGTTGCCAC 32134 Query 110765 CCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCAT 110824 || |||| || ||||| || ||| ||| |||| | |||||| ||||| | |||| Sbjct 32133 CC---TGGTCGACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCAT 32077 Query 110825 CGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCA 110884 ||| ||| ||||| || | ||| ||| ||||||||||| ||| | | | Sbjct 32076 TCGATGTACCGTTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGA 32017 Query 110885 TACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAATA 110943 ||||||||| || || ||| || ||||| ||| | |||||| | || || Sbjct 32016 GACCAATACCGCCAGCGGTCTTGGAGATCAAAGCACATGTCT-TAAGTGTATCGTAGATT 31958 Query 110944 CCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA-GG 111002 |||||||| ||| |||| || | || || ||||| || ||||||||||| ||| || Sbjct 31957 CCATCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGG-CGATGG 31899 Query 111003 CGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGT 111061 || ||||| ||||| |||||||| | || || |||| || | || ||||| | || Sbjct 31898 GGTACCCGCGTTGAAAAGTGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGT 31840 Query 111062 TGTATGTGTCGA 111073 |||||| |||| Sbjct 31839 CGTATGTCTCGA 31828 >seq2 Length=1242686 Score = 123 bits (136), Expect = 3e-23 Identities = 338/510 (66%), Gaps = 37/510 (7%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || || || || ||||| || | ||||| | ||| |||| ||| || || ||| | Sbjct 1230996 CGGTCAAATCGGCCTGGTCGCATGAGAGCCTTATCTAGAACATCAGGTCGATTGGTACCA 1230937 Query 11563 GCAATGACTACAATGCCAGTCTCATT---GTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| || | || | |||| | || ||||||||||||||| || || | ||| Sbjct 1230936 GCGAGGACCACGA--CCTG-CTCAGTTGTGTTGAAACCGTCCATTTCCGTCAGGATCTGA 1230880 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTA--- 11676 |||| || || ||||| ||||| |||||| | || || ||| Sbjct 1230879 TTGAGTGTAGCCTCGCGCTCGTCGTTT---------CCACCTCCGAAATTCTGCTTTGAT 1230829 Query 11677 ---------CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA--C 11725 || | |||||||||||| || ||||| | ||| || || ||| | | Sbjct 1230828 CGCGCACGGCCAATAGCGTCAATCTCGTCAATGAAGATGATGCAGGG--GGTACTCTTGC 1230771 Query 11726 GTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGA 11785 |||| | |||| || || || || ||| || |||||||| ||||||||||| |||| Sbjct 1230770 GTGCATTGGCGAACAGGTCCCGCACCCGCGATGCACCAACACCGACGAACATCTCTACGA 1230711 Query 11786 AGTTTGCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844 | | | | || ||| ||||| ||| ||||| ||||| ||||| | ||| ||| Sbjct 1230710 ACTCGGAGCCACTAACGCTGAA-GAAAGGAACGCCGGACTCTCCAGCTGTTGCTTTGGCG 1230652 Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904 || || |||||||| |||||||| | |||| || | ||| ||||| || || |||||| Sbjct 1230651 AGTAGTGTCTTACCGGTACCAGGCGGTCCAGAAAGGATGGCACCACGAGGAATTTTGGCA 1230592 Query 11905 CCA--CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCT 11962 ||| ||| | | | |||| || | |||||||||| || | |||| | ||| | Sbjct 1230591 CCAAGTTTCTGGAATCG-GCTC-GGGTCCTTGAGGAAGGAGACGAACTCCATGATTTCTT 1230534 Query 11963 CCTTGGCGGAGTCGATACCCTCAACATCGG 11992 ||| || ||| ||||| | ||||||| Sbjct 1230533 GCTTCGCTTCGTCCATACCAGCGACATCGG 1230504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974130001200