Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq93 266 4e-66 seq13 96.9 4e-15 >seq93 Length=73557 Score = 266 bits (294), Expect = 4e-66 Identities = 1115/1741 (64%), Gaps = 28/1741 (2%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || ||||| ||||| | ||||| || | ||||| || | | Sbjct 33490 CGGAGGTAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTG 33431 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | |||| ||| || || | |||| | || | | ||| ||||| |||||| Sbjct 33430 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAG 33371 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACA--TCCTTCATCTTGATTTCCCACACTGTGC 105767 ||||| | || ||||| | ||| | | || | | ||| ||||| || || Sbjct 33370 GCTCCACGGTCAGCAGCCATCTGAATAATAGTTCGCTGAGA--GATCTCCCAGACAGTCT 33313 Query 105768 GGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCT 105827 ||| || ||||| | || || ||||| | | ||| || || || || ||| | Sbjct 33312 TGTATAGGGTCTTGGTCTCCTCGGGGATGTTGGGGATCCTTGCGATAGAGCCACCCTCGG 33253 Query 105828 TGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGA 105887 || || | | |||||| | || |||||| | || || | ||| || |||| | Sbjct 33252 CGATGATACGGTTCTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGAGCA 33193 Query 105888 G--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGT 105945 | ||| |||||||| | |||||| || |||||| || | |||||||| | Sbjct 33192 GCCATGG--GTTGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGA 33135 Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005 ||||| || || ||||| || || || || | ||| || | |||||| || || ||||| Sbjct 33134 GGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCAT 33075 Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATC 106065 || || || | || ||| || | ||| | | || ||||| || | Sbjct 33074 GGGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGC 33015 Query 106066 CCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124 |||||| || | | | || | || |||| |||||||| |||| || | ||||| | Sbjct 33014 CCAGTCCCAGAGGTCGGTAGGCGTGACGTTCC-ACATATCATATTGGAGGATGCCTTGAG 32956 Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184 | || || ||||| |||||| ||| | || | | | || | || ||| | Sbjct 32955 AAACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAG 32896 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 || | || || || ||||| || ||||| || || | | ||| || || Sbjct 32895 AGGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTCCG 32836 Query 106245 CTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 ||| || |||| | || ||| | || || |||| ||||||||||| ||||||| Sbjct 32835 GTGATTCGAATG-GCAGGCGCAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATG 32777 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363 |||||||| | ||| || | || || || || ||||| || ||| Sbjct 32776 CCAATAGGGCGGTGACGGAAGTTGCTACGACGTGCCTCTTCGACGGGGTAGTGATTGACT 32717 Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423 || || | || ||||| || || | || |||| ||| || || || | | Sbjct 32716 TCGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAG 32657 Query 106424 TCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 106483 || || || | || | | ||| || ||| || || | || ||||| |||||| Sbjct 32656 TCGAACTCGCCACGCTTGTAGTCGACGAACGATGGGAGAGCAAGAGAAGCCAAGTTGCAA 32597 Query 106484 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTA 106543 ||||| |||||| | |||||||| | || || || |||| |||||| || Sbjct 32596 ACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGG 32537 Query 106544 ATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAG 106603 || || || | |||||| ||||| ||||| |||||| ||||||||||| |||||| | Sbjct 32536 ATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAA 32477 Query 106604 GGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTAC 106662 || | || ||||||||||| | || ||| || || | ||| | | || | ||| | || Sbjct 32476 GGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCTTCTG-GGCACGCAC 32418 Query 106663 AATGGCGTTGGCCCGTCCCTCCGCCTCGTA-CTTTGTGTAGAGGGCTTCAAACTCCTCAC 106721 | || | | || |||||| ||| || | || ||||| | || ||||| |||| Sbjct 32417 TGTCTCGCGGCCACGGCCCTCCTTCTCATAGCGGTG-ATAGAGCTCCTCGAACTCATCAC 32359 Query 106722 CCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT 106781 | |||| | ||| || || |||| || || || | || | ||| | || | Sbjct 32358 CGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTTT 32299 Query 106782 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 106841 ||| || ||||||||||| || || || |||||||| | | ||||| || | | Sbjct 32298 CCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCAC 32239 Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901 || ||||||| | || ||||| || | || | ||| | | | ||| ||||||| Sbjct 32238 GAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGCC 32179 Query 106902 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 106955 | ||||| || |||| |||| || || | ||||| ||| | || | || | Sbjct 32178 ACGGCTCGAGGTAGATGGCGAAAGCACC---TGGACGCTTGTTGCCACCCTGGTCGACGT 32122 Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015 |||| || ||| ||| | || || ||||| ||||| | ||||| ||| ||| |||| Sbjct 32121 AGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCGTTTG 32062 Query 107016 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 107075 | || | ||| || |||| | | || | || | |||||||| |||| Sbjct 32061 TGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGAGACCAATACCGCCAG 32002 Query 107076 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 107135 | ||| ||||| ||||| | |||| || | ||||| || | || ||| | Sbjct 32001 CGGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCATCAATGCTGTCTT 31942 Query 107136 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGA 107195 |||| || |||| |||||||| |||||||| || ||| ||||| || ||||| | Sbjct 31941 CCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCGTTGAAAA 31882 Query 107196 GGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACA 107254 | || || | ||||| |||| ||| | || ||||| | |||||||||||| | | | Sbjct 31881 GTGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATGGCC 31823 Query 107255 GAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTG-GGGTGT 107313 || || || || ||||||||||||| ||||| ||||| | ||||| ||| ||| || Sbjct 31822 TTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTTGTGGGCGT 31763 Query 107314 T 107314 | Sbjct 31762 T 31762 >seq13 Length=704243 Score = 96.9 bits (106), Expect = 4e-15 Identities = 298/458 (65%), Gaps = 20/458 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| |||||||| |||||||||||||| ||| | | | || || ||||| Sbjct 440281 TAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCCATG 440222 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACC-----CCAACTTGTTTGAG 117098 ||||| || || || | || || | | | |||| ||| |||| ||| Sbjct 440221 AAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACCGAGAGCCAA-------GAG 440169 Query 117099 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 117158 ||||| || | || |||||||||| | | |||| || |||||| |||| || Sbjct 440168 CAGACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGCAG 440109 Query 117159 ATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218 | || || || || || | ||| | | ||| || || || || | | ||| Sbjct 440108 AGCGCAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATGAT 440049 Query 117219 GGCGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGC 117275 ||| |||| | || | |||| | | || | | || || ||| || ||| Sbjct 440048 GGCCTGGACCGACTCCTTGCTGGGACGAGTGTTCAGGAGAGAAAAGAGGAGG--CA-GGC 439992 Query 117276 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGG 117335 || || ||| | ||||| || || ||||| || || || |||||| ||||| || Sbjct 439991 GAAATCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGG 439932 Query 117336 CATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACC 117395 ||||||||| |||||||||| ||| | || | | ||| || || |||||||||||| Sbjct 439931 CATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAGATACC 439872 Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 ||| || || ||||| | ||| || | || |||| Sbjct 439871 CTCGACGGCAGCGAACGCGACAAGACGGTTCGCAAAGG 439834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978926810960