Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq93 266 4e-66
seq13 96.9 4e-15
>seq93
Length=73557
Score = 266 bits (294), Expect = 4e-66
Identities = 1115/1741 (64%), Gaps = 28/1741 (2%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
||||| |||||||| || ||||| ||||| | ||||| || | ||||| || | |
Sbjct 33490 CGGAGGTAGTACATGCCCGTCTTTAGTCCGAGCTTCCATCCGGCGAAGTGCATGGAGGTG 33431
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| || || | |||| | || | | ||| ||||| ||||||
Sbjct 33430 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAG 33371
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACA--TCCTTCATCTTGATTTCCCACACTGTGC 105767
||||| | || ||||| | ||| | | || | | ||| ||||| || ||
Sbjct 33370 GCTCCACGGTCAGCAGCCATCTGAATAATAGTTCGCTGAGA--GATCTCCCAGACAGTCT 33313
Query 105768 GGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCT 105827
||| || ||||| | || || ||||| | | ||| || || || || ||| |
Sbjct 33312 TGTATAGGGTCTTGGTCTCCTCGGGGATGTTGGGGATCCTTGCGATAGAGCCACCCTCGG 33253
Query 105828 TGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGA 105887
|| || | | |||||| | || |||||| | || || | ||| || |||| |
Sbjct 33252 CGATGATACGGTTCTTCATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGAGCA 33193
Query 105888 G--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGT 105945
| ||| |||||||| | |||||| || |||||| || | |||||||| |
Sbjct 33192 GCCATGG--GTTGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGA 33135
Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005
||||| || || ||||| || || || || | ||| || | |||||| || || |||||
Sbjct 33134 GGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCAT 33075
Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATC 106065
|| || || | || ||| || | ||| | | || ||||| || |
Sbjct 33074 GGGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGC 33015
Query 106066 CCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124
|||||| || | | | || | || |||| |||||||| |||| || | ||||| |
Sbjct 33014 CCAGTCCCAGAGGTCGGTAGGCGTGACGTTCC-ACATATCATATTGGAGGATGCCTTGAG 32956
Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184
| || || ||||| |||||| ||| | || | | | || | || ||| |
Sbjct 32955 AAACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTTGCAATGTCGCAGGAAG 32896
Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244
|| | || || || ||||| || ||||| || || | | ||| || ||
Sbjct 32895 AGGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTCCG 32836
Query 106245 CTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAA 106303
||| || |||| | || ||| | || || |||| ||||||||||| |||||||
Sbjct 32835 GTGATTCGAATG-GCAGGCGCAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATG 32777
Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363
|||||||| | ||| || | || || || || ||||| || |||
Sbjct 32776 CCAATAGGGCGGTGACGGAAGTTGCTACGACGTGCCTCTTCGACGGGGTAGTGATTGACT 32717
Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423
|| || | || ||||| || || | || |||| ||| || || || | |
Sbjct 32716 TCGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAG 32657
Query 106424 TCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 106483
|| || || | || | | ||| || ||| || || | || ||||| ||||||
Sbjct 32656 TCGAACTCGCCACGCTTGTAGTCGACGAACGATGGGAGAGCAAGAGAAGCCAAGTTGCAA 32597
Query 106484 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTA 106543
||||| |||||| | |||||||| | || || || |||| |||||| ||
Sbjct 32596 ACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGG 32537
Query 106544 ATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAG 106603
|| || || | |||||| ||||| ||||| |||||| ||||||||||| |||||| |
Sbjct 32536 ATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAA 32477
Query 106604 GGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTAC 106662
|| | || ||||||||||| | || ||| || || | ||| | | || | ||| | ||
Sbjct 32476 GGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCTTCTG-GGCACGCAC 32418
Query 106663 AATGGCGTTGGCCCGTCCCTCCGCCTCGTA-CTTTGTGTAGAGGGCTTCAAACTCCTCAC 106721
| || | | || |||||| ||| || | || ||||| | || ||||| ||||
Sbjct 32417 TGTCTCGCGGCCACGGCCCTCCTTCTCATAGCGGTG-ATAGAGCTCCTCGAACTCATCAC 32359
Query 106722 CCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT 106781
| |||| | ||| || || |||| || || || | || | ||| | || |
Sbjct 32358 CGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTTT 32299
Query 106782 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 106841
||| || ||||||||||| || || || |||||||| | | ||||| || | |
Sbjct 32298 CCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCAC 32239
Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901
|| ||||||| | || ||||| || | || | ||| | | | ||| |||||||
Sbjct 32238 GAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGCC 32179
Query 106902 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 106955
| ||||| || |||| |||| || || | ||||| ||| | || | || |
Sbjct 32178 ACGGCTCGAGGTAGATGGCGAAAGCACC---TGGACGCTTGTTGCCACCCTGGTCGACGT 32122
Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015
|||| || ||| ||| | || || ||||| ||||| | ||||| ||| ||| ||||
Sbjct 32121 AGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACCGTTTG 32062
Query 107016 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 107075
| || | ||| || |||| | | || | || | |||||||| ||||
Sbjct 32061 TGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGAGACCAATACCGCCAG 32002
Query 107076 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 107135
| ||| ||||| ||||| | |||| || | ||||| || | || ||| |
Sbjct 32001 CGGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCATCAATGCTGTCTT 31942
Query 107136 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGA 107195
|||| || |||| |||||||| |||||||| || ||| ||||| || ||||| |
Sbjct 31941 CCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCGTTGAAAA 31882
Query 107196 GGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACA 107254
| || || | ||||| |||| ||| | || ||||| | |||||||||||| | | |
Sbjct 31881 GTGTAGGGGAAGCGTGTGTGAA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATGGCC 31823
Query 107255 GAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTG-GGGTGT 107313
|| || || || ||||||||||||| ||||| ||||| | ||||| ||| ||| ||
Sbjct 31822 TTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTTGTGGGCGT 31763
Query 107314 T 107314
|
Sbjct 31762 T 31762
>seq13
Length=704243
Score = 96.9 bits (106), Expect = 4e-15
Identities = 298/458 (65%), Gaps = 20/458 (4%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| |||||||| |||||||||||||| ||| | | | || || |||||
Sbjct 440281 TAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCCATG 440222
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACC-----CCAACTTGTTTGAG 117098
||||| || || || | || || | | | |||| ||| |||| |||
Sbjct 440221 AAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACCGAGAGCCAA-------GAG 440169
Query 117099 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 117158
||||| || | || |||||||||| | | |||| || |||||| |||| ||
Sbjct 440168 CAGACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGCAG 440109
Query 117159 ATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218
| || || || || || | ||| | | ||| || || || || | | |||
Sbjct 440108 AGCGCAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATGAT 440049
Query 117219 GGCGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGC 117275
||| |||| | || | |||| | | || | | || || ||| || |||
Sbjct 440048 GGCCTGGACCGACTCCTTGCTGGGACGAGTGTTCAGGAGAGAAAAGAGGAGG--CA-GGC 439992
Query 117276 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGG 117335
|| || ||| | ||||| || || ||||| || || || |||||| ||||| ||
Sbjct 439991 GAAATCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGG 439932
Query 117336 CATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACC 117395
||||||||| |||||||||| ||| | || | | ||| || || ||||||||||||
Sbjct 439931 CATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAGATACC 439872
Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
||| || || ||||| | ||| || | || ||||
Sbjct 439871 CTCGACGGCAGCGAACGCGACAAGACGGTTCGCAAAGG 439834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978926810960
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