Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq5 114 8e-21 >seq5 Length=873697 Score = 114 bits (126), Expect = 8e-21 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||||||||| ||||| || || | | | || ||| Sbjct 38684 ACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACCGTCTTCC 38743 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || || || || || || |||||||| | || | ||||||||||| Sbjct 38744 AGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGG 38803 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| |||||| | ||||||| || | | ||||| || | ||| ||||| Sbjct 38804 ATCTTCGATTTGAC----GTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGATGGT 38859 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || |||||||||||||| |||||||||||| Sbjct 38860 CTTGCCGGTGAGAGTCTTCACGAAGATCTGCATA 38893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632595056112