Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 >seq5 Length=873697 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 ||||| || | ||| || ||||| || || || |||||||| |||| | || | | || Sbjct 39134 CGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGATAGGGTACGGCCA 39193 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || || | ||||| || || || ||||| ||||| ||||| ||||||||||| || || Sbjct 39194 TCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATGCCCTCCTTG 39253 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || ||||| || || ||| | || | || || |||| || || ||||| |||| Sbjct 39254 TCCTGAATCTTCGACTTAACATTGTCAATGGTATCGGACGACTCGACCTCAAGCGTGATA 39313 Query 101435 GTTTTGCCGGT 101445 ||||||||||| Sbjct 39314 GTTTTGCCGGT 39324 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || || || || || || |||||||||| | || | | |||| || | || Sbjct 39429 ATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGGCCATCCTCGAGCTG 39488 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || ||||| ||||| |||||||| ||||||||||| || || || || || Sbjct 39489 CTTGCCGGCGAAGATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 39548 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||| | || | ||||| |||| ||||| || || |||| || || ||||| Sbjct 39549 GCTCTTTACGTTGTCGATCGTGTCTGACGACTCCACCTCGAGGGTGATAGTCTTACCGGT 39608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277173270678