Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq93 248 2e-60 seq13 181 2e-40 >seq93 Length=73557 Score = 248 bits (274), Expect = 2e-60 Identities = 1094/1704 (64%), Gaps = 76/1704 (4%) Strand=Plus/Minus Query 212552 CACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTT 212611 ||| || || || | ||| ||| || ||| |||| || || ||||||||||| ||||| Sbjct 33527 CACAGTGAATTGGATGGGAGCAGAGGCGGCCATGGTACGGAGGTAGTACATGCCCGTCTT 33468 Query 212612 TAGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATT 212668 ||| || ||| ||| ||| | |||||| | |||| |||| || | Sbjct 33467 TAGTCCGAGCTT---CCATCCGGCGAAGTGCATGGAGGTGA---TCTT--GCCCA----- 33421 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | ||| | || || | ||| || |||||| ||||| ||||| | | Sbjct 33420 -TGGT-AGGCTCCTT---CATGTGGATGTTTAGAGACTGAGATTGGTCGATGAAGGCTCC 33366 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | |||||| ||||| | || ||| || ||| |||| |||||| || |||||| | | Sbjct 33365 ACGGTCAGCAGCCATCTGAATAATAGTTCGCTGAGAGATCTCCCAGACAGTCTTGTATAG 33306 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGC---ACAGACCCCCTGTGT-ATGG 212844 ||| ||||| |||| | |||||| | ||| | || | |||| | ||| Sbjct 33305 GGTCTTGGTCTCCTCGGGGATGTTGGGGATCCT-TGCGATAGAGCCACCCTCGGCGATGA 33247 Query 212845 TCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGT 212904 | | | | ||||| |||| ||| | |||| || | ||| ||||| ||| Sbjct 33246 TACGGTTCTT---CATGTTCTCGGACCACAAGCCCATGTCGACGAGGTCCTTGAGCAGCC 33190 Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964 |||||||| | ||| || ||||| | ||| || | | ||| | |||||| |||| Sbjct 33189 ATGGGTTGACAACCTGAAACTCACCAGCGAGGACTCGACGGGAGTAGATGTTTGAGGTGT 33130 Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024 | ||||||| || ||||||||| || || ||||| | ||| || ||||||||||||| Sbjct 33129 ACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAGGTGGACGCAGTGGGCATGGGAG 33070 Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGT 213084 | | ||||| ||| | || || |||| | || | ||| ||||||| Sbjct 33069 CAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATCTTCTCCTTCAGCGACGCCCAGT 33010 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | | | ||| | | ||||||||||| ||| | || | |||||||| Sbjct 33009 CCCAGAGGTCGGT-AGG--------CGTGACGTTCCACATATCATATTGGAGGATGCCTT 32959 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 || || ||||| ||| | || ||||| | ||||| || | ||||||| Sbjct 32958 GAGAAACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTTGCAATGTCGCAGG 32899 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | | || ||||| | ||||||||| || || |||| ||||||| ||||| |||| Sbjct 32898 AAGAGGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCT 32839 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | || || ||| |||| || |||| |||| || || || || || || | Sbjct 32838 CCGGTGATTCGAATGGCAGGCGCAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCA 32779 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAG-ACTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 |||| || || | ||| | | ||| || | || ||| || | |||||| ||| Sbjct 32778 TGCCAATAGGGCGGTGACGGAAGTTGCTACGACGTGC-CTCTTCGACGGGGTAGTGATTG 32720 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 ||||| ||||| || || || || || | || | ||||| | | ||| | || | Sbjct 32719 ACTTCGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGG 32660 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 | |||| || | | || | || ||| || || || | |||| |||| Sbjct 32659 AAGTCGAACTCGCCACGCTTGTAGTCGACGAACGATGGGAGAGCAAGAGAAGCCAAGTTG 32600 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 ||||| || ||||| | || | |||||||| |||||||| |||||||||||| || Sbjct 32599 CAAACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTG 32540 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAGAGCAT 213622 |||||||| || || |||| ||||| ||| ||| | |||| ||||||||| ||||| Sbjct 32539 CGGATGGTACCGAGATTCTTCTGGTTGCTCTT-GCGGTTGCAGGCATCCTTGTAAAGCAT 32481 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCC 213680 | | ||| || ||||| ||| | | | || || ||| ||| || | | ||| Sbjct 32480 GAAAGGGTTACCAGTCTCCGTCTGAGCCTCGAGGAT--GGCATACCAAAGCTTCTGGGC- 32424 Query 213681 TTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAA 213739 || | | || | || ||| | | ||| || | | |||||||| | ||| Sbjct 32423 ---ACGCACTGTCTCGCGGCCACGGCCCTCCTTCTCATAGCGGTGATAGAGCTCCTCGAA 32367 Query 213740 TTCGTGGCCCCAGACCCTGTCC---AGTCCCGGA--CAGGATGCGGGACACATGAGGCTC 213794 || | || |||| |||| || || ||| | | || || ||||| || || Sbjct 32366 CTCATCACCGTAGAC---GTCCGCGAGGCCGGGAGCCTCGTTGGGG--CACATCAGCGTC 32312 Query 213795 CAGTCCCCGTCATCTCTG-ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAA 213853 || || |||| || ||| || | || |||||| || || |||| |||||| ||| ||| Sbjct 32311 CACTCGCCGTTTTC-CTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAA 32253 Query 213854 CAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAA 213913 ||||| | || | ||| ||| || ||| || || || || | ||| |||| Sbjct 32252 GAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAA 32193 Query 213914 GATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCC 213970 | || |||||||||||||| | ||||||||| || || || | || | ||||| || Sbjct 32192 TACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTTGTTGCCACC 32133 Query 213971 CTGGTCCACCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGGGTACCAGCCCGT 214026 |||||| | | | || | || ||||| ||| || || | ||| | || || | Sbjct 32132 CTGGTCGA----CGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCAT 32077 Query 214027 TGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAG 214085 | || ||| ||||| || || | || || ||||||| ||| | | | | || | | Sbjct 32076 TCGA-TGTACCGTTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTG 32018 Query 214086 AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATG 214145 || || || || || ||| ||||||||||| || || | | | || || ||| Sbjct 32017 AGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATT 31958 Query 214146 CCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGAC 214205 || | |||||||| || | | || | | ||||||| ||| | ||| ||| | Sbjct 31957 CCATCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGG 31898 Query 214206 GAGCCAGAGTTGAAAAGCGTGGGG 214229 | || | ||||||||| || ||| Sbjct 31897 GTACCCGCGTTGAAAAGTGTAGGG 31874 >seq13 Length=704243 Score = 181 bits (200), Expect = 2e-40 Identities = 357/521 (69%), Gaps = 19/521 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || |||| ||||| ||||| Sbjct 440285 CTGGTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTC 440226 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCC--GTGTCAGGCCCATCTGTTCCA-- 47954 ||||||| ||||||||||| | || |||||| |||| | || | | ||| Sbjct 440225 CATGAAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTA--CCGA---GAGCCAAG 440171 Query 47955 -GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 |||| | || || ||| |||| ||||||| |||||||||| ||||||||| | Sbjct 440170 AGCAGACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGC 440111 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || | |||| ||||| || || || |||| ||| || || ||||| | Sbjct 440110 AGAGCGCAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATG 440051 Query 48074 ATCTGCTTAACGCGGGACTC--TGAGGGTTTGT-TGCGCAGGTGCTTGGCATAGAGCATG 48130 || || || ||||| || || | || |||| | | | |||| | | Sbjct 440050 ATGGCCTGGACC---GACTCCTTGCTGGGACGAGTGTTCAGGAGA---GAAAAGAGGAGG 439997 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||| || || |||||| ||| ||||| || |||||| ||||||||||| ||| Sbjct 439996 CAGGCGAAATCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGG 439937 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | || || |||||||| || | ||||| || ||| ||||||| Sbjct 439936 CCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAG 439877 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||||||| || | | | || | | |||||| || ||| Sbjct 439876 ATACCCTCGACGGCAGCGAACGCGACAAGACGGTTCGCAAAGGTGGAGTTCTTATCAGAG 439817 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| || |||||||| |||||||| ||||||||| Sbjct 439816 ATCCATCGCAGAGCCCAGTCGGCCTTCTTGCGGATGCATGG 439776 Score = 91.5 bits (100), Expect = 3e-13 Identities = 174/253 (69%), Gaps = 9/253 (4%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| ||| ||||| | Sbjct 439649 TCTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACCTCGCCTCGGGTA 439590 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 || ||||| |||||| | ||| | || ||||| ||||| || |||||||| || | Sbjct 439589 TTTGTACTTCGCCGGAGAAGCGCTCGACTAGGTTCTCGTTGACGATGCCATCTGAGGCGG 439530 Query 48549 CAAAGAAGGCAAGGACATGTT---TAAGGAAATGGCGCTCGTTGTGGGTGAGA-GCAT-- 48602 | || ||||| ||||| || ||| ||| |||||||| || | | | || | Sbjct 439529 CGAAAAAGGCTAGGACGTGGGAGATAAAGAA---GCGCTCGTCGTCGTTCAATCGCTTGT 439473 Query 48603 TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTG 48662 ||||| | || | || ||| || || | ||||| | ||||||||||| || | Sbjct 439472 TCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCTTCGGCTGTCCAGAAGGATGCTTCGG 439413 Query 48663 CTTTTTTGTACAT 48675 | || |||||||| Sbjct 439412 CCTTCTTGTACAT 439400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931529842383360