Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq93 228 2e-54
seq13 138 2e-27
>seq93
Length=73557
Score = 228 bits (252), Expect = 2e-54
Identities = 693/1058 (66%), Gaps = 27/1058 (3%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
|| || ||||| |||||||||||||| |||||| |||||||| |||| ||||| ||
Sbjct 32893 GTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGTTTCTTAGCCTCCGGT 32834
Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536
|| ||| |||| ||||| | ||| | ||||| || || || || || || ||
Sbjct 32833 GATTCGAATGGCAGGCGCAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATGCCA 32774
Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GCTTCTGGCACGGGATAAAAGTTGACGTC 221595
|| || | ||| | |||| | || | || ||| ||||| || ||||| ||
Sbjct 32773 ATAGGGCGGTGACGGAAGTTGCTA-CGACGTGCCTCTTCGACGGGGTAGTGATTGACTTC 32715
Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655
||| | || || || || | || | ||| | | || ||| ||||||||||
Sbjct 32714 GATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGG----- 32660
Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715
|| | |||||||| | | || | || || || | || |||| ||
Sbjct 32659 -AAGTCGAACTCGCCACGCTTGTAG------TCGACGAACGATGGGAGAGCAAGAGAAGC 32607
Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775
|| ||| || || || ||||| || ||| |||| |||||||| || || |||||
Sbjct 32606 CAAGTTGCAAACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGTGCACAGGTT 32547
Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835
| || |||||| || || | || || || |||||| ||| || ||||||||
Sbjct 32546 GGAGCTGCGGATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTA 32487
Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCT 221895
||||| || || ||||||||| ||||||| | || || | ||| || | |||
Sbjct 32486 AAGCATGAAAGGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGCT-TCT 32428
Query 221896 GG-CGCTCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCGGTATAGAGCATG 221953
|| | | ||| ||| || | | | ||||| ||| ||||| | | |||||||
Sbjct 32427 GGGCACGCACTGTC-TCGCGGCCACGGCCCTC---CTTCTCATAGCGGTGATAGAGCTCC 32372
Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTC 222013
|| |||| |||||||| | || | ||||| ||| | | ||| |||||||| ||
Sbjct 32371 TCGAACTCATCACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTC 32312
Query 222014 CAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073
|| | ||| || | || | || ||||||||| || ||||||||||| || | |||
Sbjct 32311 CACTCGCCGTTTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAG 32252
Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133
|| || | || || ||| ||| ||||| ||| || | || ||||| || ||||
Sbjct 32251 AGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAAGCCAAAT 32192
Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCC 222193
| ||||||||||||||||| || |||| ||| | ||| || || |||||||||||||||
Sbjct 32191 ACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTTGTTGCCACCC 32132
Query 222194 TGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252
|| || | | | ||| | |||| ||| || || | || | || || || ||
Sbjct 32131 TGGTCGA-CGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGA 32073
Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCA--GGTTACTGGCAGACATG 222310
| |||||| ||||| |||||| | ||| ||| | | | | | | || |
Sbjct 32072 TGTACCGTTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGAGA-- 32015
Query 222311 CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370
|| ||||| || ||| || ||||||| || || |||| || || || ||| ||
Sbjct 32014 CCAATACCGCCAGCGGTCTTGGAGATCAAAGCACATGTCTTAAGTGTATCGTAGATTCCA 31955
Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAA 222430
|| || ||| ||||| | || | || || || ||||||||||||| | || |
Sbjct 31954 TCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTA 31895
Query 222431 CAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468
| ||||| || || || || |||||||| |||||
Sbjct 31894 CCCGCGTTGAAAAGTGTAGGGGAAGCGTGTGTGAAGTA 31857
>seq13
Length=704243
Score = 138 bits (152), Expect = 2e-27
Identities = 294/446 (66%), Gaps = 9/446 (2%)
Strand=Plus/Plus
Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938
|| || || || || ||||| || ||||| ||||| ||||| ||||| || || |||||
Sbjct 439845 CGTCTTGTCGCGTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTCGCCTCCATC 439904
Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998
|||||||| ||| || || ||||||||| || ||| ||||||||||||||
Sbjct 439905 TTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCG 439964
Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCAC 26058
| |||||||| | |||| ||||| |||||||| |||| | | || ||
Sbjct 439965 CGTGACGAGGGCATGCACACCGATTTCGCCTGCCTCCTCTTTTC------TCTCCTGAAC 440018
Query 26059 AAACCTTC--TCAA-GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115
| | | | ||| ||| | ||| | ||||||| || ||||| |||||| ||
Sbjct 440019 ACTCGTCCCAGCAAGGAGTCGGTCCAGGCCATCATCACTGAAGCTGTCACAATCGAGCAG 440078
Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175
|| || | | ||||||||| | |||||| ||
Sbjct 440079 GAATTCCTGACTGAGGCTCTGCCTTGCGCTCTGCTCGGCATGAACGCTACCCTCATGTGC 440138
Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235
||||||||||||| || ||||||| |||||| | || || | ||| | |||
Sbjct 440139 CAATACATTGAGTTCGTTGCCGACCGTCTGCTCTTGGCTCTCGGTAACACCAAGGTGTAC 440198
Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295
| | | | ||||| |||||||| ||||| || || || |||| || ||||||||||||
Sbjct 440199 AATGCCACCAACCCCTTCGACTTCATGGAGAATATCTCCTTGGCTGGCAAGACCAACTTC 440258
Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321
|| || ||| | || |||||||| ||
Sbjct 440259 TTCGAGAAGCGCGTTGGCGACTACCA 440284
Score = 102 bits (112), Expect = 2e-16
Identities = 163/231 (71%), Gaps = 5/231 (2%)
Strand=Plus/Plus
Query 25480 TGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCC 25539
||| | |||||||||||||| || || |||||| ||||||||||||||||| ||
Sbjct 439394 TGGCAAATGTACAAGAAGGCCGAAGCATCCTTCTGGACAGCCGAAGAGATTGATCTCTCC 439453
Query 25540 AAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTTTCTCAAGTAC 25596
||||| | ||| |||| || | || || ||||| ||| ||| || ||
Sbjct 439454 AAGGATCTCCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTCTTTATCTCCCAC 439513
Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656
|| | || || || || ||||| ||||| || || |||||||| || |||| | |||
Sbjct 439514 GTCCTAGCCTTTTTCGCCGCCTCAGATGGCATCGTCAACGAGAACCTAGTCGAGCGCTTC 439573
Query 25657 ACCAGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|| | ||||| | | ||| ||||| | ||| |||||||| ||||||||
Sbjct 439574 TCCGGCGAAGTACAAATAC-CCGAGGCGAGGTGCTTCTACGGCTTCCAGAT 439623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928841850917760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |