Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq5 96.9 2e-14
>seq5
Length=873697
Score = 96.9 bits (106), Expect = 2e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| || || | || || ||| || || || || || |||| || ||
Sbjct 38671 ACGAAGACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGT 38730
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| ||||| || || || ||||| || |||||||| || || ||||| ||||| ||
Sbjct 38731 CCTACCGTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCC 38790
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAA 480729
||||||||||| ||||| |||||| || || ||||| | | | || | |||
Sbjct 38791 CTCCTTGTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACCTCCAA 38850
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || |||||||||||||| ||||| || ||
Sbjct 38851 -GGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTG 38889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268168304707592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |