Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq93 262 5e-65 seq13 96.9 4e-15 >seq93 Length=73557 Score = 262 bits (290), Expect = 5e-65 Identities = 1107/1733 (64%), Gaps = 19/1733 (1%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| ||||| | ||||| || || ||||||||||||| || || || || | Sbjct 31766 CCCACAACACATGCTGATGCGCGTGGCTGTCGGCATCCACGGCGAGGATATCGAGAAGGC 31825 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | |||||||||||| | ||||| || | ||| |||| ||||| | || || || | Sbjct 31826 CATCGAGACATACGACTACATGTCGCAGAAGTAC-TTCACACACGCTTCCCCTACACTTT 31884 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || ||||| ||| || |||||||| |||||||| |||| || ||||| | Sbjct 31885 TCAACGCGGGTACCCCATCGCCTCAGATGTCGTCCTGCTTCCTCATCGACATGAAGGAAG 31944 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | || ||||| | || |||| | ||||| ||||| ||| |||| Sbjct 31945 ACAGCATTGATGGAATCTACGATACACTTAAGACATGTGCTTTGATCTCCAAGACCGCTG 32004 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| | || | || | | |||| || ||| | || |||| Sbjct 32005 GCGGTATTGGTCTCAACGTGCACCGCATTCGTGCCACCGGCTCCTACATTGGTGGCACAA 32064 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | ||| ||| ||||| | ||||| ||||| || || | ||| ||| || ||||| | Sbjct 32065 ACGGTACATCGAATGGTCTCATTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACG 32124 Query 75570 TAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 | | || | || ||||| ||| | | |||| ||||| | || || |||| Sbjct 32125 TCGACCAGGGTGGCAACAAGCGTCC--AGGTG-CTTTCGCCATCTACCTCGAGCCGTGGC 32181 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | || ||| | | | ||| | || | || ||||| || | ||||||| ||| Sbjct 32182 ACGCTGATGTATTTGGCTTCTTGGACCTTCGTAAGAACCACGGCAAGGAAGAGGTTCGTG 32241 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | || ||||| | | |||||||| || || || ||||||||||| || |||| Sbjct 32242 CCCGCGACCTCTTCTACGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTGCAGGAAA 32301 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 || | ||| | || | || || || |||| || || ||| | |||| |||| Sbjct 32302 ACGGCGAGTGGACGCTGATGTGCCCCAACGAGGCTCCCGGCCTCGCGGACGTCTACGGTG 32361 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAG-TATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 | ||||| || | ||||| || | ||||| ||||||| | | | | ||| || Sbjct 32362 ATGAGTTCGAGGAGCTCTAT-CACCGCTATGAGAAGGAGGGCCGTGGCCGCGAGACAGTG 32420 Query 75863 CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | ||| | || | ||||| | || || ||| | | |||||||||||||| | || | Sbjct 32421 CGTGCC-CAGAAGCTTTGGTATGCCATCCTCGAGGCTCAGACGGAGACTGGTAACCCTTT 32479 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 ||||||||||||||||| || ||| ||||| ||||| |||||| | || || ||| Sbjct 32480 CATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAATCTCGGTACCATCCG 32539 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 ||||| || || ||||| || || | |||||||| | |||||| |||||||| Sbjct 32540 CAGCTCCAACCTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAGGTCGCTGTTTG 32599 Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTA 76101 ||| ||||| || | || || ||| || ||| | | || | || || || | Sbjct 32600 CAACTTGGCTTCTCTTGCTCTCCCATCGTTCGTCGACTACAAGCGTGGCGAGTTCGACTT 32659 Query 76102 TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAG 76161 | || || || ||| |||| || | || || ||||| || | || || Sbjct 32660 CCAGAAGCTGCACGAAGTCACTCAGGTCGTGACGCGTAATCTGAATAAGATTATCGAAGT 32719 Query 76162 AAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTT 76221 ||| || ||||| || || || || | || ||| | |||||||| | Sbjct 32720 CAATCACTACCCCGTCGAAGAGGCACGTCGTAGCAACTTCCGTCACCGCCCTATTGGCAT 32779 Query 76222 GGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTGATTCAGATG 76280 |||||| ||||||||||| |||| || || | ||| || | |||| || ||| | Sbjct 32780 GGGTGTGCAAGGTCTCGCCGATGCCTTCCTTGCTCTGCGCCTGC-CATTCGAATCACCGG 32838 Query 76281 AAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGA 76340 | || ||| | | || || ||||| || ||||| || || || | || | Sbjct 32839 AGGCTAAGAAACTCAACATTCAGATCTTCGAGACCATCTACCATGCTGCTCTCACCTCTT 32898 Query 76341 GTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 || || | || | | | || | ||| |||||| ||||| || || | || | Sbjct 32899 CCTGCGACATTGCAAAGGAACTCGGCCCATATAAGACATACGAGGGCTCGCCTGTTTCTC 32958 Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGGAT 76459 |||| | || || | |||||||| |||| || | || | | | || ||||||| Sbjct 32959 AAGGCATCCTCCAATATGATATGT-GGAACGTCACGCCTACCGACCTCTGGGACTGGGCG 33017 Query 76460 GTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 76519 || ||||| || || | ||| | || ||| || | || || || ||| Sbjct 33018 TCGCTGAAGGAGAAGATTGCTCAGCATGGTGTCCGCAACTCCCTCCTCATTGCTCCCATG 33077 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || || || |||||| | || ||| | || || || || ||||| || || ||||| || Sbjct 33078 CCCACTGCGTCCACCTCCCAGATCCTTGGCAACAACGAGTGCTTCGAGCCGTACACCTCA 33137 Query 76580 AACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTC 76639 ||||||||| | || |||||| ||||||||| |||||||| || || Sbjct 33138 AACATCTACTCCCGTCGAGTCCTCGCTGGTGAGTTTCAGGTTGTCAACCCATGGCTGCTC 33197 Query 76640 AATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCG 76699 || |||||| | || || | |||||| || | |||||| | | || | | | Sbjct 33198 AAGGACCTCGTCGACATGGGCTTGTGGTCCGAGAACATGAAGAACCGTATCATCGCCGAG 33257 Query 76700 GGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACA 76759 ||||| || || || ||| | | ||||| || || | ||||| || ||| || Sbjct 33258 GGTGGCTCTATCGCAAGGATCCCCAACATCCCCGAGGAGACCAAGACCCTATACAAGACT 33317 Query 76760 GTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATT 76819 || ||||| ||| | | | | ||| | ||||| || || ||||| |||||| Sbjct 33318 GTCTGGGAGATCTCTCAGCGAACTATTATTCAGATGGCTGCTGACCGTGGAGCCTTCATC 33377 Query 76820 GATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCT 76879 || ||| ||| | | || | |||| | || || ||| |||| || | || Sbjct 33378 GACCAATCTCAGTCTCTAAACATCCACATGAAGGAGCCTACCATGGGCAAGATCACCTCC 33437 Query 76880 ATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 ||||| | || ||||| | || || || || || |||||||| ||||| Sbjct 33438 ATGCACTTCGCCGGATGGAAGCTCGGACTAAAGACGGGCATGTACTACCTCCG 33490 >seq13 Length=704243 Score = 96.9 bits (106), Expect = 4e-15 Identities = 298/458 (65%), Gaps = 20/458 (4%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || | || ||| | ||||| || || ||||||||||||||| || || | Sbjct 439834 CCTTTGCGAACCGTCTTGTCGCGTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTTCCT 439893 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | | || | ||| |||||||||| ||||||||||| ||||| |||||| || | Sbjct 439894 TCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACG 439953 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | || ||||| || || ||||| | ||| || || ||| || ||| || || Sbjct 439954 AGCTCATTTCGCGTGACGAGGGCATGCACACCGATTTCGCC-TG--CCTCCTCTTTTCTC 440010 Query 65249 TGCGTAA---TAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 | | || | | |||| | || | |||| |||||| | | || || || | Sbjct 440011 TCCTGAACACTCGTCCCAGCAAGGAGTCGGTCCAGGCCATCATCACTGAAGCTGTCACAA 440070 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 | ||| | | ||| | || || || || || ||| |||| |||||| || Sbjct 440071 TCGAGCAGGAATTCCTGACTGAGGCTCTGCCTTGCGCTCTGCTCGGCATGAACGCTACCC 440130 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-----GGT 65420 |||| | | |||||||||| || | || ||||| ||| |||| ||| Sbjct 440131 TCATGTGCCAATACATTGAGTTCGTTGCCGACCGTCTGCTC-------TTGGCTCTCGGT 440183 Query 65421 GCCACCCA--TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGAT 65478 |||| | | | || || | || || || ||||| ||||| || || | | | | Sbjct 440184 AACACCAAGGTGTACAATGCCACCAACCCCTTCGACTTCATGGAGAATATCTCCTTGGCT 440243 Query 65479 GGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||||||||| |||||||| ||||| ||||| Sbjct 440244 GGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTA 440281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567705891520