Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq93 141 3e-28 seq12 105 2e-17 >seq93 Length=73557 Score = 141 bits (156), Expect = 3e-28 Identities = 556/874 (64%), Gaps = 3/874 (0%) Strand=Plus/Minus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 || |||| || | |||||| ||||||||| || || |||||| || | |||||||| Sbjct 32577 CGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGATTCTTCT 32518 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || | ||| || ||||||||||| || ||| | ||| | || |||||| ||| Sbjct 32517 GGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATGAAAGGGTTACCAGTCTCCGTCT 32458 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805 | || || || || ||| || | ||||| | | || | | | ||| | Sbjct 32457 GAGCCTCGAGGATGGCATACCAAAGCTTCTGGGCACGCACTGTCTCGCGGCCACGGCCCT 32398 Query 155806 CCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865 || |||||| ||| ||| | | || |||||||| || || || | Sbjct 32397 CCTTCTCATAGCGGTGATAGAGCTCCTCGAACTCATCACCGTAGACGTCCGCGAGGCCGG 32338 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925 | || | |||||| | ||||| ||| || | ||||||| ||| || | Sbjct 32337 GAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCGTTTTCCTGCACACGCTTCATGAAGA 32278 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 ||| ||| | ||| ||||| ||||| | || ||| || | |||||| | Sbjct 32277 GATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGT 32218 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || || || ||||| | | ||||| || ||||| || || || || | Sbjct 32217 TCTTACGAAGGTCCAAGAAGCCAAATACATCAGCGTGCCACGGCTCGAGGTAGATGGCGA 32158 Query 156046 AACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 || ||| | | | ||||||||||| || || || |||||||| || ||| |||||| Sbjct 32157 AAGCACCTGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACAC 32098 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| ||||| | |||||| || || || || || || | ||| | || || | | Sbjct 32097 GGAGCATGGGAATGAGACCATTCGATGTACCGTTTGTGCCACCAATGTAGGAGCCGGTGG 32038 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 |||| || | | || |||||||| || | || || || ||| ||| Sbjct 32037 CACGAATGCGGTGCACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCACATG 31978 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 ||| | |||| | | || || ||||| || || | ||| | || |||| | Sbjct 31977 TCTTAAGTGTATCGTAGATTCCATCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGG 31918 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAAT 156342 | | ||||| ||| || || |||||||| |||||||| | || || | || | Sbjct 31917 ACGACATCTGAGGCGATGGGGTACCCGCGTTGAAAAGTGTAGGGGAAGCGTGTGTGAAGT 31858 Query 156343 ACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATAC 156402 |||| | ||||| || ||||||||||| | |||||| | || ||||| || | Sbjct 31857 ACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCGATATCCTCGCCGTGGATGC 31798 Query 156403 AGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCA 156462 || || || | |||| ||| || || || || || ||| | || | || || | Sbjct 31797 CGACAGCCACGCGCATCAGCATGTGTTGTGGGCGTTCGGCAACCTTGCCGTTGATGCGGA 31738 Query 156463 GAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 | ||||||| ||| || || || || || ||||| Sbjct 31737 GGAGGTATGAGCGCTCGAGCGTCTTGAAGCCGAA 31704 >seq12 Length=714740 Score = 105 bits (116), Expect = 2e-17 Identities = 178/255 (70%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGC-GTCATATAGCCG 251465 || || ||||| | | |||||||| || | ||||||||||| | || | | ||||| Sbjct 83159 ATTAGGCCACAAATGTCGCACACATGCACCGTATAAGCATCAGAGACCGTGA-AGAGCCG 83101 Query 251466 ACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 |||| ||| || ||||| || | |||||||||||| || ||||| || ||||| Sbjct 83100 CTCCTTCAAGAACGCAGCAGCACCATGAGCAATCATACAATCGCGTTCCATCTCTCCGAA 83041 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585 ||| |||||||| || | || | |||||| |||||||||| |||||| | | || Sbjct 83040 ACGCAGACCACCGTCCCTCGCACGACCCTCCACAGGCTGACGTGTGAGAATCTGTAGGGG 82981 Query 251586 ACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGC 251645 |||| | ||| || ||| || | ||||| ||| | | |||||| ||| ||| Sbjct 82980 ACCGCGAGCACGGGCGTGAATCTTGTCGTCGACCATGTGCCTCAAACGCTGATAGTATGT 82921 Query 251646 GGGACCGATGAAGAT 251660 || || | |||||| Sbjct 82920 CGGCCCCAAGAAGAT 82906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471812810153598