Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq5 82.4 6e-11
>seq5
Length=873697
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || || || ||| | |||||||| ||||| ||| | || || | |
Sbjct 38892 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACCTTGGAGGTTGAATCGAGC 38833
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | || ||| |||||| ||||| || ||| | || || ||
Sbjct 38832 GATACCATCGATAACGTCAAATCGAAGATCCAAGACAAGGAGGGCATTCCACCTGACCAG 38773
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | ||||| | || |||||||||||||| || | || || | | || ||||||
Sbjct 38772 CAGCGTCTTATCTTCGCTGGTAAACAGCTGGAAGACGGTAGGACGCTCTCTGACTACAAC 38713
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500
||||| || || |||||| ||||| ||||| | | || || || |||
Sbjct 38712 ATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGTCTTCGTGGCGGA 38665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840321997222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |