Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 >seq5 Length=873697 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || ||| | || ||||| ||||| ||| | || || | || Sbjct 38892 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACCTTGGAGGTTGAATCGAGC 38833 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | || ||| ||||| || || || ||| | || || ||| Sbjct 38832 GATACCATCGATAACGTCAAATCGAAGATCCAAGACAAGGAGGGCATTCCACCTGACCAG 38773 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | || |||||||||||||| |||| | || | | ||||||||| Sbjct 38772 CAGCGTCTTATCTTCGCTGGTAAACAGCTGGAAGACGGTAGGACGCTCTCTGACTACAAC 38713 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| |||||||||||| ||||| ||||| Sbjct 38712 ATTCAGAAGGAGTCTACGCTGCACTTGGTG 38683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875565227006