Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq5 147 4e-30 >seq5 Length=873697 Score = 147 bits (162), Expect = 4e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || |||||||| ||||| || ||||| || || || ||||| || | ||||| Sbjct 38677 ACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACC 38736 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || ||||| ||||| ||||| || | || || || || || || || ||||| Sbjct 38737 GTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTT 38796 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| ||||| | ||| || || || || ||||| | | ||| || ||||| || || Sbjct 38797 GTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGAT 38856 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| || || |||||||| Sbjct 38857 GGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| || || ||||| ||||| ||||| || || | Sbjct 38892 TACCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCG 38951 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || ||||||| || || ||||| || || || | ||| |||||||||| Sbjct 38952 AGAGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAG 39011 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| |||||||| | || || || || || ||||| | || | Sbjct 39012 GGATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCA 39071 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || |||||||| ||||| ||||| || || |||||||| Sbjct 39072 CCTCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120 Score = 93.3 bits (102), Expect = 8e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 ||||||||||| || ||||| ||||| || || ||||| | | || || || || || Sbjct 39146 TGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGATAGGGTACGGCCATCCTCGAGCTGC 39205 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || || ||||| | | || |||||||| || || || ||||| || |||||||| Sbjct 39206 TTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCTTC 39265 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || ||||| ||||| ||||| | || || || | || || || ||||| ||| Sbjct 39266 GACTTAACATTGTCAATGGTATCGGACGACTCGACCTCAAGCGTGATAGTTTTGCCGGTC 39325 Query 82788 A 82788 | Sbjct 39326 A 39326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824004766106