Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 4e-30
>seq5
Length=873697
Score = 147 bits (162), Expect = 4e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || |||||||| ||||| || ||||| || || || ||||| || | |||||
Sbjct 38677 ACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACC 38736
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || ||||| ||||| ||||| || | || || || || || || || |||||
Sbjct 38737 GTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTT 38796
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||| ||||| | ||| || || || || ||||| | | ||| || ||||| || ||
Sbjct 38797 GTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGAT 38856
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 38857 GGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 38892
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || ||||| || || ||||| ||||| ||||| || || |
Sbjct 38892 TACCACCACGGAGACGGAGCACCAAGTGGAGCGTGGATTCCTTCTGAATATTGTAGTCCG 38951
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || ||||||| || || ||||| || || || | ||| ||||||||||
Sbjct 38952 AGAGAGTACGCCCATCTTCTAACTGCTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAG 39011
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || |||||||| |||||||| | || || || || || ||||| | || |
Sbjct 39012 GGATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCCGATGACTCCA 39071
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || |||||||| ||||| ||||| || || ||||||||
Sbjct 39072 CCTCGAGCGTAATGGTCTTGCCAGTCAATGTCTTGACGAAAATCTGCAT 39120
Score = 93.3 bits (102), Expect = 8e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
||||||||||| || ||||| ||||| || || ||||| | | || || || || ||
Sbjct 39146 TGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGATAGGGTACGGCCATCCTCGAGCTGC 39205
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || || ||||| | | || |||||||| || || || ||||| || ||||||||
Sbjct 39206 TTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCTTC 39265
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
| || ||||| ||||| ||||| | || || || | || || || ||||| |||
Sbjct 39266 GACTTAACATTGTCAATGGTATCGGACGACTCGACCTCAAGCGTGATAGTTTTGCCGGTC 39325
Query 82788 A 82788
|
Sbjct 39326 A 39326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981824004766106
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |