Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq93 309 3e-79 seq13 111 2e-19 seq5 104 2e-17 seq44 86.0 6e-12 seq9 84.2 2e-11 >seq93 Length=73557 Score = 309 bits (342), Expect = 3e-79 Identities = 1012/1563 (65%), Gaps = 31/1563 (2%) Strand=Plus/Minus Query 148233 TCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGC 148292 |||| ||||| | || ||| | | || || ||||||||||| || ||||| || || Sbjct 33211 TCGACGAGGTCCTTGAGCAGCCATGGGTTGACAACCTGAAACTCACCAGCGAGGACTCGA 33152 Query 148293 CGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCG 148352 || || | ||| || |||| || || ||||||||||||| | ||||| | | Sbjct 33151 CGGGAGTAGATGTTTGAGGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAG 33092 Query 148353 GTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATT 148412 || | || ||||||||| || | || || |||||||| | ||| | | || Sbjct 33091 GTGGACGCAGTGGGCATGGGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATC 33032 Query 148413 TTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTAC 148472 || |||||| | ||||||||||||||| | || || ||||||||||| || || Sbjct 33031 TTCTCCTTCAGCGACGCCCAGTCCCAGAGGTCGGTAGGCGTGACGTTCCACATATCATAT 32972 Query 148473 TGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCC 148532 || || ||||| | | | || ||||||||| | | || || ||| | || Sbjct 32971 TGGAGGATGCCTTGAGAAACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTT 32912 Query 148533 GCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTG 148592 || | |||||| | ||| || | | ||| || |||||| || || ||||| Sbjct 32911 GCAATGTCGCAGGAAGAGGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTG 32852 Query 148593 AGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGG 148652 || | ||| | |||| | |||| ||||| | || || ||||| || Sbjct 32851 AGTTTCTTAGCCTCCGGTGATTCGAATGGCAGGCGCAGAGCAAGGAAGGCATCGGCGAGA 32792 Query 148653 CCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT-CGAG 148711 || || || |||| |||||| || ||||| | |||| | || || |||| ||| Sbjct 32791 CCTTGCACACCCATGCCAATAGGGCGGTGACGGAAGTTGCTACGACGTGC-CTCTTCGAC 32733 Query 148712 CGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCT 148771 || ||||| ||| ||||| ||||| | ||||| ||| ||| |||| || | | Sbjct 32732 GGGGTAGTGATTGACTTCGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTC 32673 Query 148772 GCGCAGC------AATTCAAAATCGTA---CTTGTCATCTACGATGCATCGGTTCACGGC 148822 | ||||| || || || ||| ||||| || |||| || || | || Sbjct 32672 GTGCAGCTTCTGGAAGTCGAACTCGCCACGCTTGTAGTCGACGAACGATGGG---AGAGC 32616 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 | ||| || | ||||| || || |||||| || ||| ||||||| | |||||| | Sbjct 32615 AAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGT 32556 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 |||||| ||| || ||| || | ||||| || |||||||||| |||||| || Sbjct 32555 GCACAGGTTGGAGCTGCGGATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGC 32496 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGA---ACCG 148999 |||||||| |||||| | || ||||| ||| ||| | || | ||| ||| Sbjct 32495 ATCCTTGTAAAGCATGAAAGGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCA 32436 Query 149000 ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059 | || | ||| || |||||| || | || ||||||| ||| || ||| Sbjct 32435 AAGC---TTCTGGGCACGCACTGTCTCGCGGCCACGGCCCTCCTTCTCATAGCGGTGATA 32379 Query 149060 CAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACAT 149119 ||| ||||||| | || |||||| || |||| ||||| || || |||||||| Sbjct 32378 GAGCTCCTCGAACTCATCACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACAT 32319 Query 149120 GAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC 149179 |||| |||| |||||| | | ||| |||||||| || |||||||| | ||| || || Sbjct 32318 CAGCGTCCACTCGCCGTTTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGC 32259 Query 149180 GTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCAC 149239 ||| | ||||||||| || ||||| ||| ||| || |||| | | Sbjct 32258 GTAGAAGAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAA 32199 Query 149240 GCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG-- 149297 || |||| || |||||||||||||| | ||| | |||| || || |||||| Sbjct 32198 GCCAAATACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTTGTT 32139 Query 149298 -CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG-- 149354 || ||||||||||||| ||| | ||||||| | || || | ||| || |||| Sbjct 32138 GCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGG---AATGAG 32082 Query 149355 -CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCAC 149413 ||| | | || ||||| || | |||| |||| || || | |||||| Sbjct 32081 ACCATTCGATGTACCGTTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCAC 32022 Query 149414 GTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGT 149472 ||||| || || ||||| || ||| ||||| || || ||| || || || Sbjct 32021 GTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCACATGTCTTA-AGTGTATCGT 31963 Query 149473 AGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAA 149532 |||| || || |||||||| ||||||| | || ||||| || |||| || || Sbjct 31962 AGATTCCATCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCG 31903 Query 149533 AACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCA 149592 | | || || || ||| | || ||| |||||||| || || ||||| ||| Sbjct 31902 ATGGGGTACCCGCGTTGAAAAGTGTAGGGGAAGCGTGTGTGAAGTACTTCTGCGACATGT 31843 Query 149593 TCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCA 149652 ||||| | ||||| | || || || ||||| |||||||| | || ||||||| Sbjct 31842 AGTCGTATGTCTCGATGGCCTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCA 31783 Query 149653 TCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTT 149712 ||||||| || || || || || || || ||| || ||| | ||| | | Sbjct 31782 TCAGCATGTGTTGTGGGCGTTCGGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCT 31723 Query 149713 CTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGT 149772 | || |||||| |||| ||| | | ||||| || |||||| | | | ||||||| | || Sbjct 31722 CGAGCGTCTTGAAGCCGAAGAATTGGTAGTTGAAATCGCGGTCATAGACAATGGCCGAGT 31663 Query 149773 CGA 149775 || Sbjct 31662 TGA 31660 >seq13 Length=704243 Score = 111 bits (122), Expect = 2e-19 Identities = 336/520 (65%), Gaps = 17/520 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| ||||| ||||| ||||| || ||||| || ||||| ||| || || || | Sbjct 440285 CTGGTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTC 440226 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || | || | | || | | |||||| Sbjct 440225 CATGAAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACCGAGAGCCAAGAGCAG 440166 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||||||||| | ||||||| ||||||||||| |||| || Sbjct 440165 ACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGCAGAGC 440106 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 |||| ||| || | || |||| ||| || || || || ||| ||||| Sbjct 440105 GCAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATGATGGC 440046 Query 120591 GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACA-------GGC 120643 ||| | | | |||| | || | | |||| | || | ||| Sbjct 440045 C---------TGGACCGACTCCTTGC-TGGGACGAGTGTTCAGGAGAGAAAAGAGGAGGC 439996 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | || || || ||||||| ||||||||| ||||| || ||||||||| || || |||| Sbjct 439995 AGGCGAAATCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGGC 439936 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 ||||||||| || | |||| | |||| |||| ||| ||| || ||||| | Sbjct 439935 CGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAGA 439876 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823 ||||| ||| || || ||||| | || | || || || | |||| || Sbjct 439875 TACCCTCGACGGCAGCGAACGCGACAAGACGGTTCGCAAAGGTGGAGTTCTTATCAGAGA 439816 Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 |||| || ||||| |||||||| ||||| | ||| || Sbjct 439815 TCCATCGCAGAGCCCAGTCGGCCTTCTTGCGGATGCATGG 439776 >seq5 Length=873697 Score = 104 bits (114), Expect = 2e-17 Identities = 129/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| || || | | | ||||||||||||||||| Sbjct 39436 GTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGGCCA-TCCTCGAGCTGCTTGCC 39494 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | |||||||| ||||| || |||||||||||||| |||||| ||| Sbjct 39495 GGCGAAGATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGCTCTT 39554 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | || | |||||| | | |||||| |||| ||||| || || ||||| Sbjct 39555 TACGTTGTCGATCGTGTCTGACGACTCCACCTCGAGGGTGATAGTCTTACCGGT 39608 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 ||||| || ||||| |||||||| || | | | | ||| || || | |||||||| Sbjct 38924 GTGGATTCCTTCTGAATATTGTAGTC--CGAGAGAGTACGCCCATCTTCTAACTGCTTGC 38981 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| ||||||| || ||||| || |||||||| || ||||| || ||||| || Sbjct 38982 CAGCGAAAATGAGACGTTGCTGATCTGGAGGGATACCCTCCTTATCCTGAATCTTCGACT 39041 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | || || | | |||||| |||| || | ||| ||||| |||| | Sbjct 39042 TGACGTTGTCGATGGTATCCGATGACTCCACCTCGAGCGTAATGGTCTTGCCAGTCAATG 39101 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 39102 TCTTGACGAAAATCTGCAT 39120 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | ||| ||| || ||||| || || Sbjct 38696 GTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACCGTCTTCCAGCTGTTTACCA 38755 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 38756 GCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATCTTCGATTTG 38815 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| | | || || || | ||||| ||| |||||||| ||||| Sbjct 38816 ACGTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTC 38875 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 38876 TTCACGAAGATCTGCAT 38892 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/177 (72%), Gaps = 4/177 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || ||||| ||||| |||||||| ||| || | | ||| |||||||||||||||| Sbjct 39152 GTAGACTCCTTCTGGATATTGTAGTCGG--ATAGGGTACGGCCATCCTCGAGCTGCTTGC 39209 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | |||||||| || || || ||||| |||||||| ||||| || Sbjct 39210 CGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCTTCGACT 39269 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | | |||| || |||| | ||| || || | |||| ||||||||||||| Sbjct 39270 TAACATTGTCAATGGTATCGGACGACTCGACCTCAAGCGTGATAGTTTTGCCGGTCA 39326 >seq44 Length=299893 Score = 86.0 bits (94), Expect = 6e-12 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| ||| | ||| ||| | |||||||| Sbjct 198051 AAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA-TCCTCGAG 197993 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||||||||| ||| | || || ||||||||||| || || ||||| |||||||| Sbjct 197992 CTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 197939 >seq9 Length=754770 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || ||||| || ||||| ||| | ||| |||||||||||||||||| Sbjct 276177 GTCGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 276236 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| || || ||||| |||||||| |||||| |||| Sbjct 276237 GCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 276296 Query 133584 A 133584 | Sbjct 276297 A 276297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419265138960