Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq93 309 3e-79
seq13 111 2e-19
seq5 104 2e-17
seq44 86.0 6e-12
seq9 84.2 2e-11
>seq93
Length=73557
Score = 309 bits (342), Expect = 3e-79
Identities = 1012/1563 (65%), Gaps = 31/1563 (2%)
Strand=Plus/Minus
Query 148233 TCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGC 148292
|||| ||||| | || ||| | | || || ||||||||||| || ||||| || ||
Sbjct 33211 TCGACGAGGTCCTTGAGCAGCCATGGGTTGACAACCTGAAACTCACCAGCGAGGACTCGA 33152
Query 148293 CGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCG 148352
|| || | ||| || |||| || || ||||||||||||| | ||||| | |
Sbjct 33151 CGGGAGTAGATGTTTGAGGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGGGAG 33092
Query 148353 GTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATT 148412
|| | || ||||||||| || | || || |||||||| | ||| | | ||
Sbjct 33091 GTGGACGCAGTGGGCATGGGAGCAATGAGGAGGGAGTTGCGGACACCATGCTGAGCAATC 33032
Query 148413 TTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTAC 148472
|| |||||| | ||||||||||||||| | || || ||||||||||| || ||
Sbjct 33031 TTCTCCTTCAGCGACGCCCAGTCCCAGAGGTCGGTAGGCGTGACGTTCCACATATCATAT 32972
Query 148473 TGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCC 148532
|| || ||||| | | | || ||||||||| | | || || ||| | ||
Sbjct 32971 TGGAGGATGCCTTGAGAAACAGGCGAGCCCTCGTATGTCTTATATGGGCCGAGTTCCTTT 32912
Query 148533 GCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTG 148592
|| | |||||| | ||| || | | ||| || |||||| || || |||||
Sbjct 32911 GCAATGTCGCAGGAAGAGGTGAGAGCAGCATGGTAGATGGTCTCGAAGATCTGAATGTTG 32852
Query 148593 AGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGG 148652
|| | ||| | |||| | |||| ||||| | || || ||||| ||
Sbjct 32851 AGTTTCTTAGCCTCCGGTGATTCGAATGGCAGGCGCAGAGCAAGGAAGGCATCGGCGAGA 32792
Query 148653 CCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT-CGAG 148711
|| || || |||| |||||| || ||||| | |||| | || || |||| |||
Sbjct 32791 CCTTGCACACCCATGCCAATAGGGCGGTGACGGAAGTTGCTACGACGTGC-CTCTTCGAC 32733
Query 148712 CGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCT 148771
|| ||||| ||| ||||| ||||| | ||||| ||| ||| |||| || | |
Sbjct 32732 GGGGTAGTGATTGACTTCGATAATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTC 32673
Query 148772 GCGCAGC------AATTCAAAATCGTA---CTTGTCATCTACGATGCATCGGTTCACGGC 148822
| ||||| || || || ||| ||||| || |||| || || | ||
Sbjct 32672 GTGCAGCTTCTGGAAGTCGAACTCGCCACGCTTGTAGTCGACGAACGATGGG---AGAGC 32616
Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882
| ||| || | ||||| || || |||||| || ||| ||||||| | |||||| |
Sbjct 32615 AAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGCGCGGTGTACTCGATGATCTCAGT 32556
Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942
|||||| ||| || ||| || | ||||| || |||||||||| |||||| ||
Sbjct 32555 GCACAGGTTGGAGCTGCGGATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGC 32496
Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGA---ACCG 148999
|||||||| |||||| | || ||||| ||| ||| | || | ||| |||
Sbjct 32495 ATCCTTGTAAAGCATGAAAGGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCA 32436
Query 149000 ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059
| || | ||| || |||||| || | || ||||||| ||| || |||
Sbjct 32435 AAGC---TTCTGGGCACGCACTGTCTCGCGGCCACGGCCCTCCTTCTCATAGCGGTGATA 32379
Query 149060 CAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACAT 149119
||| ||||||| | || |||||| || |||| ||||| || || ||||||||
Sbjct 32378 GAGCTCCTCGAACTCATCACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACAT 32319
Query 149120 GAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC 149179
|||| |||| |||||| | | ||| |||||||| || |||||||| | ||| || ||
Sbjct 32318 CAGCGTCCACTCGCCGTTTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGC 32259
Query 149180 GTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCAC 149239
||| | ||||||||| || ||||| ||| ||| || |||| | |
Sbjct 32258 GTAGAAGAGGTCGCGGGCACGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAA 32199
Query 149240 GCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG-- 149297
|| |||| || |||||||||||||| | ||| | |||| || || ||||||
Sbjct 32198 GCCAAATACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTTGTT 32139
Query 149298 -CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG-- 149354
|| ||||||||||||| ||| | ||||||| | || || | ||| || ||||
Sbjct 32138 GCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGG---AATGAG 32082
Query 149355 -CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCAC 149413
||| | | || ||||| || | |||| |||| || || | ||||||
Sbjct 32081 ACCATTCGATGTACCGTTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCAC 32022
Query 149414 GTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGT 149472
||||| || || ||||| || ||| ||||| || || ||| || || ||
Sbjct 32021 GTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCACATGTCTTA-AGTGTATCGT 31963
Query 149473 AGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAA 149532
|||| || || |||||||| ||||||| | || ||||| || |||| || ||
Sbjct 31962 AGATTCCATCAATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCG 31903
Query 149533 AACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCA 149592
| | || || || ||| | || ||| |||||||| || || ||||| |||
Sbjct 31902 ATGGGGTACCCGCGTTGAAAAGTGTAGGGGAAGCGTGTGTGAAGTACTTCTGCGACATGT 31843
Query 149593 TCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCA 149652
||||| | ||||| | || || || ||||| |||||||| | || |||||||
Sbjct 31842 AGTCGTATGTCTCGATGGCCTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCA 31783
Query 149653 TCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTT 149712
||||||| || || || || || || || ||| || ||| | ||| | |
Sbjct 31782 TCAGCATGTGTTGTGGGCGTTCGGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCT 31723
Query 149713 CTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGT 149772
| || |||||| |||| ||| | | ||||| || |||||| | | | ||||||| | ||
Sbjct 31722 CGAGCGTCTTGAAGCCGAAGAATTGGTAGTTGAAATCGCGGTCATAGACAATGGCCGAGT 31663
Query 149773 CGA 149775
||
Sbjct 31662 TGA 31660
>seq13
Length=704243
Score = 111 bits (122), Expect = 2e-19
Identities = 336/520 (65%), Gaps = 17/520 (3%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| ||||| ||||| ||||| || ||||| || ||||| ||| || || || |
Sbjct 440285 CTGGTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTC 440226
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | || || | || | | || | | ||||||
Sbjct 440225 CATGAAGTCGAAGGGGTTGGTGGCATTGTACACCTTGGTGTTACCGAGAGCCAAGAGCAG 440166
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || || ||||||||||| | ||||||| ||||||||||| |||| ||
Sbjct 440165 ACGGTCGGCAACGAACTCAATGTATTGGCACATGAGGGTAGCGTTCATGCCGAGCAGAGC 440106
Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590
|||| ||| || | || |||| ||| || || || || ||| |||||
Sbjct 440105 GCAAGGCAGAGCCTCAGTCAGGAATTCCTGCTCGATTGTGACAGCTTCAGTGATGATGGC 440046
Query 120591 GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACA-------GGC 120643
||| | | | |||| | || | | |||| | || | |||
Sbjct 440045 C---------TGGACCGACTCCTTGC-TGGGACGAGTGTTCAGGAGAGAAAAGAGGAGGC 439996
Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703
| || || || ||||||| ||||||||| ||||| || ||||||||| || || ||||
Sbjct 439995 AGGCGAAATCGGTGTGCATGCCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTGAGGC 439936
Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763
||||||||| || | |||| | |||| |||| ||| ||| || ||||| |
Sbjct 439935 CGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAACCACTGAAGAAGA 439876
Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823
||||| ||| || || ||||| | || | || || || | |||| ||
Sbjct 439875 TACCCTCGACGGCAGCGAACGCGACAAGACGGTTCGCAAAGGTGGAGTTCTTATCAGAGA 439816
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
|||| || ||||| |||||||| ||||| | ||| ||
Sbjct 439815 TCCATCGCAGAGCCCAGTCGGCCTTCTTGCGGATGCATGG 439776
>seq5
Length=873697
Score = 104 bits (114), Expect = 2e-17
Identities = 129/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||||||| || || | | | |||||||||||||||||
Sbjct 39436 GTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTACGGCCA-TCCTCGAGCTGCTTGCC 39494
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | |||||||| ||||| || |||||||||||||| |||||| |||
Sbjct 39495 GGCGAAGATCAAGCGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGCTCTT 39554
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
| | || | |||||| | | |||||| |||| ||||| || || |||||
Sbjct 39555 TACGTTGTCGATCGTGTCTGACGACTCCACCTCGAGGGTGATAGTCTTACCGGT 39608
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521
||||| || ||||| |||||||| || | | | | ||| || || | ||||||||
Sbjct 38924 GTGGATTCCTTCTGAATATTGTAGTC--CGAGAGAGTACGCCCATCTTCTAACTGCTTGC 38981
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| ||||||| || ||||| || |||||||| || ||||| || ||||| ||
Sbjct 38982 CAGCGAAAATGAGACGTTGCTGATCTGGAGGGATACCCTCCTTATCCTGAATCTTCGACT 39041
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | || || | | |||||| |||| || | ||| ||||| |||| |
Sbjct 39042 TGACGTTGTCGATGGTATCCGATGACTCCACCTCGAGCGTAATGGTCTTGCCAGTCAATG 39101
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 39102 TCTTGACGAAAATCTGCAT 39120
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| || | ||| ||| || ||||| || ||
Sbjct 38696 GTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACCGTCTTCCAGCTGTTTACCA 38755
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || || ||||||||||| || || ||||| |||||||| |||||| |||
Sbjct 38756 GCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATCTTCGATTTG 38815
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | || ||| | | || || || | ||||| ||| |||||||| |||||
Sbjct 38816 ACGTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGATGGTCTTGCCGGTGAGAGTC 38875
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 38876 TTCACGAAGATCTGCAT 38892
Score = 89.7 bits (98), Expect = 5e-13
Identities = 127/177 (72%), Gaps = 4/177 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521
|| ||||| ||||| |||||||| ||| || | | ||| ||||||||||||||||
Sbjct 39152 GTAGACTCCTTCTGGATATTGTAGTCGG--ATAGGGTACGGCCATCCTCGAGCTGCTTGC 39209
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | |||||||| || || || ||||| |||||||| ||||| ||
Sbjct 39210 CGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCTTCGACT 39269
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
| | | |||| || |||| | ||| || || | |||| |||||||||||||
Sbjct 39270 TAACATTGTCAATGGTATCGGACGACTCGACCTCAAGCGTGATAGTTTTGCCGGTCA 39326
>seq44
Length=299893
Score = 86.0 bits (94), Expect = 6e-12
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| | ||| ||| | ||||||||
Sbjct 198051 AAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA-TCCTCGAG 197993
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567
||||||||| ||| | || || ||||||||||| || || ||||| ||||||||
Sbjct 197992 CTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 197939
>seq9
Length=754770
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| || || ||||| || ||||| ||| | ||| ||||||||||||||||||
Sbjct 276177 GTCGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 276236
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| |||| || ||||||||||| || || ||||| |||||||| |||||| ||||
Sbjct 276237 GCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 276296
Query 133584 A 133584
|
Sbjct 276297 A 276297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419265138960
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