Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq5 96.9 2e-15
>seq5
Length=873697
Score = 96.9 bits (106), Expect = 2e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||||| || | ||| ||||| ||| || || || ||||| |||||
Sbjct 39121 ACCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGA 39180
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || | || || | || || ||||| || ||||| |||||||||||| ||||
Sbjct 39181 TAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGG 39240
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| ||| ||| | | ||||| ||| | ||| ||| || || |
Sbjct 39241 AATGCCCTCCTTGTCCTGAATCTTC-GACTTAACATTGTCAATGGTATCGGACGACTCGA 39299
Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725
| |||| |||||| ||||| || ||
Sbjct 39300 CCTCAAGCGTGATAGTTTTGCCGGT 39324
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| | |||||| || || || ||| || || |||||||| || ||||| || | |
Sbjct 38677 ACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACC 38736
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
||| |||| ||||| || || || || | ||||||||| || | || | || || ||
Sbjct 38737 GTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTT 38796
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713
||| || ||| ||| | || | ||| ||||| ||||| || || | |||||
Sbjct 38797 GTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGAT 38856
Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || || || | || || || ||||||||||||
Sbjct 38857 GGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCATA 38893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702982455680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |