Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 2e-15 >seq5 Length=873697 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||||| || | ||| ||||| ||| || || || ||||| ||||| Sbjct 39121 ACCACCGCGCAGGCGTAAGACGAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCGGA 39180 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | || || ||||| || ||||| |||||||||||| |||| Sbjct 39181 TAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCTGGCGG 39240 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| ||| | | ||||| ||| | ||| ||| || || | Sbjct 39241 AATGCCCTCCTTGTCCTGAATCTTC-GACTTAACATTGTCAATGGTATCGGACGACTCGA 39299 Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725 | |||| |||||| ||||| || || Sbjct 39300 CCTCAAGCGTGATAGTTTTGCCGGT 39324 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || || || ||| || || |||||||| || ||||| || | | Sbjct 38677 ACGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTCCTACC 38736 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| |||| ||||| || || || || | ||||||||| || | || | || || || Sbjct 38737 GTCTTCCAGCTGTTTACCAGCGAAGATAAGACGCTGCTGGTCAGGTGGAATGCCCTCCTT 38796 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 ||| || ||| ||| | || | ||| ||||| ||||| || || | ||||| Sbjct 38797 GTCTTGGATCTTCGATTTGACGTTATCGATGGTATCGCTCGATTCAACCTCCAAGGTGAT 38856 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || | || || || |||||||||||| Sbjct 38857 GGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCATA 38893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702982455680