Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq93 172 5e-38 >seq93 Length=73557 Score = 172 bits (190), Expect = 5e-38 Identities = 758/1182 (64%), Gaps = 37/1182 (3%) Strand=Plus/Minus Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 ||| | |||| |||||| | ||||||||||| | ||| || | ||| | ||| ||| Sbjct 32830 TCGAATGGCAGGCGCAGAGCAAGGAAGGCATCGGCGAGACCTTGCACACCCATGCCAATA 32771 Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCG-CTATGGGATAGTGGTTGCGATCAAT 147365 || || || |||||| || || ||| | | ||| ||||| ||| || || Sbjct 32770 GGGCGGTGACGGAAGTTGCTACGACGTGC-CTCTTCGACGGGGTAGTGATTGACTTCGAT 32712 Query 147366 AATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA 147425 |||||| || || |||||| || || | ||| | | | || |||| ||| || | Sbjct 32711 AATCTTATTCAGATTACGCGTCACGACCTGAGTGACTTCGTGCAGCTTCTGGAAGTCG-A 32653 Query 147426 AGTCCC-------GTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGC 147478 | || | || ||||| | ||| || || | || | ||| |||| |||| Sbjct 32652 ACTCGCCACGCTTGTAGTCGAC--GAACG-ATGGG---AGAGCAAGAGAAGCCAAGTTGC 32599 Query 147479 AGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCAT 147537 | || || ||| || |||| || |||||| | ||| || | |||||||||| || Sbjct 32598 AAACAGCGACCTCATCAGGCG-CGGTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTG 32540 Query 147538 TTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATG 147597 ||| || | ||| | ||| ||||| || || ||||| || || ||| | |||||| Sbjct 32539 CGGATGGTACCGAGATTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATG 32480 Query 147598 TACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCT 147654 | || || ||||| || | || | ||| | ||| | || | ||| || Sbjct 32479 AAAGGGTTACCAGTCTCCGTCTGAGCCTCGAGGATGGCATACCAAAGC---TTCTGGGCA 32423 Query 147655 CGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCG 147714 ||||| || || |||||||| || || || || | || | | ||| ||||| Sbjct 32422 CGCACTGTCTCGCGGCCACGGCCCTCCTTCTCATAGCGGTGATAGAGCTCCTCGAACTCA 32363 Query 147715 TCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCG 147774 || |||||| || || ||||||||| || | || |||||||||| |||| | || Sbjct 32362 TCACCGTAGACGTCCGCGAGGCCGGGAGCCTCGTTGGGGCACATCAGCGTCCACTCGCCG 32303 Query 147775 TCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGC 147834 | | | || || ||| || ||||| || | |||||| ||||| | || ||||| Sbjct 32302 TTTTCCTGCACACGCTTCATGAAGAGATCGGGGATCCACAGAGCGTAGAAGAGGTCGCGG 32243 Query 147835 GCTTTGCAATCCTCGGCGC--CCATGTTGCGTTTCAAATT--AAGCACGCTATAGATGTC 147890 || | | |||| | || || | | | || | ||| | || | | | || Sbjct 32242 GCA---CGAACCTCTTCCTTGCCGTGGTTCTTACGAAGGTCCAAGAA-GCCAAATACATC 32187 Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTC 147947 |||||||| || || | ||||| ||| | |||||| |||||| || |||||||| Sbjct 32186 AGCGTGCCACGGCTCGAGGTAGATGGCGAAAGCACCTGGACGCTTGTTGCCACCCTGGTC 32127 Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007 ||| | ||| | ||||||| | || || | |||||| || || ||| || || Sbjct 32126 GACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGGAATGAGACCATTCGATGTACC 32067 Query 148008 GTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC 148067 ||| ||| | || | | |||| ||| || | ||||||||| | ||||| || Sbjct 32066 GTTTGTGCCACCAATGTAGGAGCCGGTGGCACGAATGCGGTGCACGTTGAGACCAATACC 32007 Query 148068 GCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAA-TGTCGTGTAGATGCCGTCGATGC 148126 ||| || ||| || || ||| || | | || ||| |||||| || || |||| Sbjct 32006 GCCAGCGGTCTTGGAGATCAAAGCACA-TGTCTTAAGTGTATCGTAGATTCCATCAATGC 31948 Query 148127 TGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCG 148186 |||| | || | | | | | || || || |||| || || | || ||||| Sbjct 31947 TGTCTTCCTTCATGTCGATGAGGAAGCAGGACGACATCTGAGGCGATGGGGTACCCGCGT 31888 Query 148187 AGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAA 148246 |||||| || || ||||| || || | || || ||| | || ||||| | Sbjct 31887 TGAAAAGTGTAGGGGAAGCGTGTGTGAAGTACTTCTGCGACATGTAGTCGTATGTCTCGA 31828 Query 148247 TAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTG 148306 | || | ||||| || |||||||| ||||| | || |||||||| |||||||| |||| Sbjct 31827 TGGCCTTCTCGATATCCTCGCCGTGGATGCCGACAGCCACGCGCATCAGCATGTGTTGTG 31768 Query 148307 GTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAAC 148366 | ||||||||||| | |||||| ||| || ||| ||||| || ||| | | Sbjct 31767 GGCGTTCGGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCTCGAGCGTCTTGAAGC 31708 Query 148367 CAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | ||| | | ||| | ||||| | || || | ||||||| Sbjct 31707 CGAAGAATTGGTAGTTGAAATCGCGGTCATAGACAATGGCCG 31666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609686759440