Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq13 91.5 1e-13
seq5 89.7 5e-13
>seq13
Length=704243
Score = 91.5 bits (100), Expect = 1e-13
Identities = 125/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771
|||||| | || | ||| |||||| | || | ||| ||||||||||| || |||||
Sbjct 439568 GCTCGACTAGGTTCTCGTTGACGATGCCATCTGAGGCGGCGAAAAAGGCTAGGACGTGGG 439509
Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831
| |||||| || || | |||||||| | ||||||||||| | | |||||||| |
Sbjct 439508 AGATAAAGAAGCGCTCGTCGTCGTTCAATCGCTTGTTCCAGTCGTGGAGATCCTTGGAGA 439449
Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCA 110886
|| ||||||||| | ||||| | | | |||||||||||| ||||||
Sbjct 439448 GATCAATCTCTTCGGCTGTCCAGAAGGATGCTTCGGCCTTCTTGTACATTTGCCA 439394
>seq5
Length=873697
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || ||||| || || || | || ||| |||| || || | || |
Sbjct 39120 ATGCAGATTTTCGTCAAGACATTGACTGGCAAGACCATTACGCTCGAGGTGGA-GTCATC 39062
Query 25235 G-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
| |||| ||||| | || || || ||| ||||| |||||||| || || |||||
Sbjct 39061 GGATACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCAGATCA 39002
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|||| | ||||||| || ||||| || | ||||||| | | | || || |||||
Sbjct 39001 GCAACGTCTCATTTTCGCTGGCAAGCAGTTAGAAGATGGGCGTACTCTCTCGGACTACAA 38942
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTG 25384
|||||| || |||||||| | || || |||
Sbjct 38941 TATTCAGAAGGAATCCACGCTCCACTTGGTG 38911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445092986825280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |