Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013-
04-10] 254 sequences; 35,484,281 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq13 147 3e-29
seq93 104 3e-16
>seq13
Length=704243
Score = 147 bits (162), Expect = 3e-29
Identities = 210/292 (72%), Gaps = 13/292 (4%)
Strand=Plus/Plus
Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838
||| |||||||| || |||||||| || ||||| ||||| ||||| ||| | || |||
Sbjct 439394 TGGCAAATGTAC-AAGAAGGCCGAAGCATCCTTCTGGACAGCCGAAGAGATTGATCTCTC 439452
Query 1455839 CGCCGA----CACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891
| || |||| ||||| || ||| ||||||||||||| || |||
Sbjct 439453 CAAGGATCTCCACG----ACTGGAACAAGCGATTGAACGACGACGAGCGCTTCTTTATCT 439508
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||||||| ||||||| |||||||| ||||||||||| ||||||||| | ||
Sbjct 439509 CCCACGTCCTAGCCTTTT-TCGCCGCCTCAGATGGCATCGTCAACGAGAACCTAGTCGAG 439567
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| || || ||| | || ||||| | | || ||||| |||||||||
Sbjct 439568 CGCTTCTCCGGCGAAGTACAAATACCCGAGGCGAGGTGCTTCTACGGCTTCCAGATCATG 439627
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063
|| || ||||||||||| || || ||||| || ||||||||||||||| |||
Sbjct 439628 ATGGAGAACATCCACTCAGAGACATACTCTCTGCTGATCGACACCTACATCA 439679
>seq93
Length=73557
Score = 104 bits (114), Expect = 3e-16
Identities = 203/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942
|| ||||| |||||||||| ||| ||||| || | || || || || || ||
Sbjct 31833 ACATACGACTACATGTCGCAGAAGTACTTCACACACGCTTCCCCTACACTTTTCAACGCG 31892
Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002
|| || || || |||| ||||| ||||| || | |||||||||| || ||
Sbjct 31893 GGTACCCCATCGCCTCAGATGTCGTCCTGCTTCCTCATCGACATGAAGGAAGACAGCATT 31952
Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062
|| || ||||| || || || ||| || || | ||||||||| | || ||||| ||
Sbjct 31953 GATGGAATCTACGATACACTTAAGACATGTGCTTTGATCTCCAAGACCGCTGGCGGTATT 32012
Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122
||| | || ||| | || ||| | ||| ||||| | | ||||| |||||
Sbjct 32013 GGTCTCAACGTGCACCGCATTCGTGCCACCGGCTCCTACATTGGTGGCACAAACGGTACA 32072
Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|| || || || | |||||||| || || | ||| |||| || |||||||||||||||
Sbjct 32073 TCGAATGGTCTCATTCCCATGCTCCGTGTCTACAACAACACTGCTCGCTACGTCGACCAG 32132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177786701233148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |